Gene Dgeo_1913 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1913 
Symbol 
ID4057661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2017004 
End bp2019091 
Gene Length2088 bp 
Protein Length695 aa 
Translation table11 
GC content67% 
IMG OID641230944 
Productbifunctional aldehyde dehydrogenase/enoyl-CoA hydratase 
Protein accessionYP_605377 
Protein GI94986013 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases
[COG2030] Acyl dehydratase 
TIGRFAM ID[TIGR02278] phenylacetic acid degradation protein paaN 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0600585 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0559603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCC TCCCCACCCC CGATATCCTC CGCCCCGCCT CCTACGTCTA CGGCACCTGG 
CACACTGCCC CCGAAGGTCA GACCCTCTAC GACGCCGTGT ATGGCCGCCC CGTCGCCGTC
ATCTCCTCTG AGGGAGTGGA TTTCGCGGCG GCTTTGCGCT ACGGGCGCGA GGTGGGCGGT
CCGGCGCTGC GCCGGCTGAC CTTCCACACG CGGGCACGGT TGCTGCGGGC ACTGGCAACC
TACCTGCTGG AGCGCAAGGA GGACTATTAC CGGCTCAGCC TGCTGACCGG CGCGACCCGC
CGTGACGGCT GGGTGGACAT CGAGGGCGGC ATTGGGACGC TGTTGAGCTA CGCGAGCATG
GCCCGCCGCG AGCTGCCGGA CGAGCGGTTT CTCCCCGACG GCAAGGTCGA ACAGCTCGGC
AAGGGCGGCA CCTTCGCAGG CCGTCACCTC CTGGTGCCGC GTGAGGGCGT GGCGGTGCAG
ATCAACGCCT ACAACTTCCC GGTCTGGGGA ATGCTGGAAA AACTTGCCCC GGCCTTCATC
GCTGGGATGC CCAGCCTGGT CAAGCCCGCA CCGCAGACGG CTTACCTTGC TGAGCGGGTG
GTGCGTGACA TCATCGCTTC GGGCCTGCTG CCGGAAGGGG CACTGCAACT GGTGACAGGA
GAGCCGGGCG ACCTGCTCGA CCACCTGGAG GAGCAGGACC TGGTGGCCTT TACGGGGTCG
GCGGCCACAG CGGCGAAGCT GCGGGTTCAT CCCAACCTTG TCGCGCGCAA CGTGCCCTTC
AATACCGAGG CCGACAGTCT GAATGCCTCC GTGTTGGGCC TGACGGTACG TCCCGAGGAC
CCGGAGTTCG CCCTCTATGT GCGCGAGGTG GCCCGCGAGA TGACGGGCAA GGCCGGGCAG
AAATGCACCG CGATCCGCCG CGCAATCGTT CCCCGCGACC GGGTGGAGGA GGTTGTGGCG
GCGCTGAGGC AGGAACTGAG CAAGGTCACT ATCGGTGATC CCGCCCGTGA CGACGTGCGG
ATGGGGGCGC TTGTCAGCAC TGAGCAGCGG GAACGGGTAC GTGCGACGCT GGCGGCGCTA
CAACGCGAAG CCCAACTGGT GATCGGCGGC GAGGAACGCG AACTGCTGGG CGGCGACCGT
GAGAAGGGCG CCTTCCTCGA CCCCACCCTG TTGCTGTGTG AGTCGCCCCT CACGGCCCGC
GGTCCGCACG AGCTGGAAGC CTTCGGCCCG GTGGCGACCC TCCTTCCCTA CGACACCTTG
GAGGAAGCCG CGTACCTCAC CCGAATGGGC CGCGGCAGCC TGGCAGGAAG CGTCGTCACC
CATGACCGTG CGGAGGCCGC CGAACTCGTG ATGGGCATGG CGAGCAGCCA CGGGCGAATC
CTGATCCTCA ACCGCGAGAA CGCGAAGGAA AGCACCGGGC ACGGCTCGCC CCTCCCGCAG
CTGCTCCACG GGGGTCCCGG GCGCGCGGGT GGCGGCGCGG AGCTGGCGGG AATTTCTGGC
ATCAAACACC ACATGAATAA GGTGGCCGTG CAGGCCGATC CAACCACCCT CGCCGCCATC
ACGCACGAGT ACGTGCCCGG CGCAGAGGTC AAGGAAGACG TGATCCACCC CTTCCGCAAA
TCTTTTGATG AAATCCAGGT CGGCGACAGC CTGCTCACGC ACCGCCGCAC CGTCACCGAG
GCGGACATCG TCAACTTCGC GGCCCTGACA GGCGACCACT TCTATGCCCA CGTGGACGAG
ATCGGCGCGC GCGAAGGCAT CTTCGGGAGG CGGGTCGCCC ACGGCTACTT CCTGATCTCT
GCCGCTGCCG GACAGTTCGT GTGGCCTGCG CCCGGCCCGG TGTTGGCGAA CTACGGCCTG
GAAAACCTGC GCTTTATCAC CCCGGTCGGC ATCGGGGACA CCATCCGCAC CCGCCTCACC
TGCAAGCGCA AGATTCGCAA GGACCTGCGC CCCGGCGAGA CCCGTCCGAC GGGGGTTGTC
GAGTGGCACG CCGAGATCAC CAACCAGCGG GATGAACTGG TGGCGACCTA CGACATCCTG
ACGCTGGTAG AACGTGCCCC CGACGCGGCG GACAACCTCA CCGTCTGA
 
Protein sequence
MTTLPTPDIL RPASYVYGTW HTAPEGQTLY DAVYGRPVAV ISSEGVDFAA ALRYGREVGG 
PALRRLTFHT RARLLRALAT YLLERKEDYY RLSLLTGATR RDGWVDIEGG IGTLLSYASM
ARRELPDERF LPDGKVEQLG KGGTFAGRHL LVPREGVAVQ INAYNFPVWG MLEKLAPAFI
AGMPSLVKPA PQTAYLAERV VRDIIASGLL PEGALQLVTG EPGDLLDHLE EQDLVAFTGS
AATAAKLRVH PNLVARNVPF NTEADSLNAS VLGLTVRPED PEFALYVREV AREMTGKAGQ
KCTAIRRAIV PRDRVEEVVA ALRQELSKVT IGDPARDDVR MGALVSTEQR ERVRATLAAL
QREAQLVIGG EERELLGGDR EKGAFLDPTL LLCESPLTAR GPHELEAFGP VATLLPYDTL
EEAAYLTRMG RGSLAGSVVT HDRAEAAELV MGMASSHGRI LILNRENAKE STGHGSPLPQ
LLHGGPGRAG GGAELAGISG IKHHMNKVAV QADPTTLAAI THEYVPGAEV KEDVIHPFRK
SFDEIQVGDS LLTHRRTVTE ADIVNFAALT GDHFYAHVDE IGAREGIFGR RVAHGYFLIS
AAAGQFVWPA PGPVLANYGL ENLRFITPVG IGDTIRTRLT CKRKIRKDLR PGETRPTGVV
EWHAEITNQR DELVATYDIL TLVERAPDAA DNLTV