Gene Dgeo_1906 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1906 
Symbol 
ID4057654 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp2003124 
End bp2003486 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content65% 
IMG OID641230934 
Productglycine cleavage system protein H 
Protein accessionYP_605370 
Protein GI94986006 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0509] Glycine cleavage system H protein (lipoate-binding) 
TIGRFAM ID[TIGR00527] glycine cleavage system H protein 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0411351 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCC CCCCTGAACT GAAGTACGCC CCCTCTCACG AATGGCTCGC GCCCGACGGC 
ACCGTCGGCA TCAGCGATTT TGCGCAGGAC CAGCTGGGCG ACGTGGTGTA TGTCGAGCTG
CCCGAGGTGG GCCGGGTGGT GACCGCGGGT GAGACAGTCG CCGTCGTGGA GAGCGTGAAG
ACCGCCTCCG ACATCTATGC GCCCGCCAGC GGCACCATCG TCGCCGTCAA CGAACAGCTT
TCGGGGAGTC CCGAACTGGT CAACCAAAGT CCCTACACCG ATGGTTGGCT CTTTCGGCTG
GACGTGACCG AGGAAAGCGG CGAGCTGATG GACGCCGAAG CGTACGCCGC CGCGAACGGC
TGA
 
Protein sequence
MQTPPELKYA PSHEWLAPDG TVGISDFAQD QLGDVVYVEL PEVGRVVTAG ETVAVVESVK 
TASDIYAPAS GTIVAVNEQL SGSPELVNQS PYTDGWLFRL DVTEESGELM DAEAYAAANG