Gene Dgeo_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1901 
Symbol 
ID4059027 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1999418 
End bp2000074 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content66% 
IMG OID641230929 
Productbifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 
Protein accessionYP_605365 
Protein GI94986001 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.200935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGC TCGAACAACT GAAGTTTGAC GACCGCGGCC TGATTCCCGT CGTGACGCAG 
GACGCCCGAA CCGGCGCGGT GCTGATGCAA GCCTATGCCA ACCGCGCCGC GGTCGAACGT
ACCCTGACGA CACGCGAGGC CACCTACTAC AGCCGTTCGC GCGGCGAGCA GTGGGTCAAG
GGCCAGACGA GCGGCCACAC CCAGCAGGTG GTGAGCGTCC ACGCCGACTG TGACGGCGAC
AGCCTGCTGT ACCGGGTGGA GCAAACTGGC CCAGCGTGCC ACACCGGCGA ATATTCCTGT
TTTCACACTC CGCCACTGCA GGAGGGGGCG GCGGCCAGCG GTCTAGACGG CACCCTGGAG
CGCGTGTACC AGACGATCAC GGAGCGCCTC GCGACCCTCC CCGAGAACAG TTACGTGGCG
CGGCTGCATG CCGGTGGCCT CGACCGCGTG CTGAAAAAGG TGAGTGAGGA GGCGGGTGAG
GTGCTGCTCG CGGCCAAAAA CGGGGATCGC GCCGAACTCG CGACCGAGGT GGCCGATCTG
CTGTTTCACA CCCTCTTTGC AATGGCGGAA GTGGGGGTCT CGCCCGCCGA TGTGGTCGCC
GTGCTGCGGG AGCGCGAGGG CAAGAGCGGC CTGAAGGGGC CAAAGGAAGT GGGCTAA
 
Protein sequence
MSLLEQLKFD DRGLIPVVTQ DARTGAVLMQ AYANRAAVER TLTTREATYY SRSRGEQWVK 
GQTSGHTQQV VSVHADCDGD SLLYRVEQTG PACHTGEYSC FHTPPLQEGA AASGLDGTLE
RVYQTITERL ATLPENSYVA RLHAGGLDRV LKKVSEEAGE VLLAAKNGDR AELATEVADL
LFHTLFAMAE VGVSPADVVA VLREREGKSG LKGPKEVG