| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1887 |
|---|
| Symbol | aceE |
|---|
| ID | 4059013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1983610 |
|---|
| End bp | 1986318 |
|---|
| Gene Length | 2709 bp |
|---|
| Protein Length | 902 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641230915 |
|---|
| Product | pyruvate dehydrogenase subunit E1 |
|---|
| Protein accession | YP_605351 |
|---|
| Protein GI | 94985987 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2609] Pyruvate dehydrogenase complex, dehydrogenase (E1) component |
|---|
| TIGRFAM ID | [TIGR00759] pyruvate dehydrogenase E1 component, homodimeric type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCACCGC GCGCCGCCCT GTCCCCACAG GAGCGTGAAC AGCTCAATTC TGTGGAAACG
CAGGAGTGGC TCGACTCGCT CGCCTACGTT CTGGCAGACG CAGGCGACGA CCGCGCCGCG
CAGCTGTTGG AAGAGCTGGA CCACTACGCC TACTTCCACG GCGCCCCCAT CCTCTTTAAG
CAGAACACGC CCTACATCAA CACGATCGAC GTAGAGGCGC AGCCCGAGTA TCCCGGCAAC
CTGGAGCTGG AGCGCAAGAT TCGCAACGCG GTGCGCTGGA ACGCCGTCGT GATGGTGCTG
CGGGCCAACA AGCGGGCCGA AGGCATCGGC GGGCACCTCG CGACCTACGC GAGCAGTGCG
GAGCTGTACG AGGTGGGCTT TAACCACTTT TTCCGGGGGC ACGGCGCGGG GGTGAACCGC
GACCTCATCT TCTTCCAGGG TCACGCCAGT CCCGGCATCT ATGCCCGCTC CTTCCTGGAG
GGCCGCATCA GCGAGGCGCA GATGAACAAC TTCCGCCGGG AACTCAGCCC CGATGGTCCC
GGCCTATCGA GTTACCCGCA TCCCTGGCTG ATGCCGCACT ACTGGGAGTT TCCGACCGTC
AGCATGGGTC TCGGGCCCAT CCAGGCGATC TACCAGGCGC GGTACATCCG GTACCTCGAA
AACCGCGGTC TCAAGGCGAA GGGCAACGCG AAGGTCTGGG CCTTTTTGGG GGACGGCGAG
ATGGACGAGC CGCAGTCGGT GGGTGCGCTG CGCTTTGCCG CCTACGAGAA CCTGGACAAT
CTCGTCTTTG TGCTCAACGC GAACCTGCAG CGCCTCGACG GCCCGGTGCG CGCCAACTCC
AAGGTGATCC AGGAGTTCGA GGCCCTGTTC CGCGGGGCGG GCTGGAACGT GATCAAGGTC
GTGTGGGACT CCAAGTGGGA CGAGCTGCTC GCCAAGGACT ACAACGGCGC GATCGTCAAG
CGCTTCGAGG CGCTCGTGGA CGGCGAGTCG CAGCGCTACG CGGCCTTTGG TGGCAAGGAG
CTGCGCGAGA AGTTCTTCAA CACGCCCGAA CTTCAGCAGC TGATCGAAGG CTGGAGCGAC
GCCGACCTTG AACTGCTCAA CCGTGGCGGT CACGATGTCA AGAAGGTCTT TGCTGCCTAC
GACGCCGCCG TCAAGCACCG GGGCCAGCCC ACCGTCATCA TCGCCCGCAC CGTGAAGGGC
TACGGCCTGG GCGAGACAGC GCAGGCGCGC AACGTGGCCC ACCAGGTCAA GAAGCTGGAC
TTCCACGCGC TGAAGAACCT GCGCGACCTG CTTGAGCTGC CGCTGACTGA CGAGCAGGTC
GAACACCTGG AGTACTACAA CCCCGGCCCC GACAGCCCCG AGATTCGGTA CATGCTCGAG
CGCCGCGCGG CGCTGGGCGG CTTCGTGCCC GAGCGCCGGG TGGATTACCC GCGCCCCAGC
GTCCCCACCG GCGAGTTCTA CGAGGAATTT GCCGCCGGCA GCAAGGGCCG CGCCGTCAGC
ACCACGATGG CCGCCGTGCA GATCTTGAGC AAGCTGCTGC GCGACCCCGA GGTCGGCAAG
TACATCGTGC CGATTGTGCC CGATGAGGCG CGCACCTTTG GGATGGACGC CCTGGTGCCA
CGCATCGGCA TCTACTCGCC GCGTGGCCAG ACCTACACCC CAGTCGACTC CGGCAGCCTG
ATGGTCTACA AGGAGAGCAC CGACGGCCAG ATGCTGGAAG AGGGCATCAC CGAAGACGGG
GCGATGTCGT CCTGGATTGC GGCCGCAACC GCCTACGCCA ACCACGGCGT TCCGACCATC
CCCTTCTACG TCTTCTACTC GATGTTTGGC ATGCAGCGCA TCGGCGACCT GGTGTGGGCT
GCGGCCGACC AGCGTGCGCG CGGCTTCCTT TTCGGCGCGA CGGCGGGCCG CACCACGCTG
GCGGGTGAGG GATTGCAGCA CCAGGACGGC AACAGCCTGC TGCAGGCCTA TGTGGTGCCC
ACCCTCAAGG TGTATGACCC AGCCTTTGCC TACGAACTCG CGGTGATTGT CGAACACGGC
ATCCAGCGGA TGTACGTGGA CAACATCGAC GAGTTTTATT ACGTCACCAT CGACAACGAG
AACGAGGTGC AGCCGCCCAT GCCGGAGGAC GGCCGCAGCC ACGACGAGAT TCGCCAGGGC
ATCATCCGGG GACTGTACCG CTTTCAGCAG AGCGGCAACA AAAAGGCCAA GCTGCGCGCT
CAGCTTCTCG CCAGCGGCCC CGCGATGGGC GCAGCGCTCG AAGCGGTGCA GAAGCTGGAA
GCCTACGGCG TGGCCGCCGA CGTGTGGAGC GTGACGAGTT ACAAGGAACT CCACCAGGAC
GCCCTGCTGA CCCAGCGTTA CAACATGCTG CACCCCACCG CAGAACCGCG CGTCTCCTAC
GTGGCCTCTC AGCTCAGCCA GGAGAACGCT CCCGGCGTGC TGGTTTCAGT GAGTGATTAC
GTGAAACTGG GCGCCGACGG CCTGAACGGA CACCTCGATC GCAAGCTCTG GGTGCTGGGC
ACCGACGGCT TTGGCCGCTC GGAAGACCGC TCCGAACTGC GTGACTTCTT CGAGGTGGAC
GCCCGCTACG TGACCCTCGC CACCCTCTAC GCCCTCCAGC GCGAAGGCAA GCTCAAGGGA
GACGTGGTGG CGCGGGCCAT TTCCGAGCTT GGCATCGACC CGGAACGCGA GGCGCCAGTT
TTGCGTTAA
|
|---|
| Protein sequence | MPPRAALSPQ EREQLNSVET QEWLDSLAYV LADAGDDRAA QLLEELDHYA YFHGAPILFK
QNTPYINTID VEAQPEYPGN LELERKIRNA VRWNAVVMVL RANKRAEGIG GHLATYASSA
ELYEVGFNHF FRGHGAGVNR DLIFFQGHAS PGIYARSFLE GRISEAQMNN FRRELSPDGP
GLSSYPHPWL MPHYWEFPTV SMGLGPIQAI YQARYIRYLE NRGLKAKGNA KVWAFLGDGE
MDEPQSVGAL RFAAYENLDN LVFVLNANLQ RLDGPVRANS KVIQEFEALF RGAGWNVIKV
VWDSKWDELL AKDYNGAIVK RFEALVDGES QRYAAFGGKE LREKFFNTPE LQQLIEGWSD
ADLELLNRGG HDVKKVFAAY DAAVKHRGQP TVIIARTVKG YGLGETAQAR NVAHQVKKLD
FHALKNLRDL LELPLTDEQV EHLEYYNPGP DSPEIRYMLE RRAALGGFVP ERRVDYPRPS
VPTGEFYEEF AAGSKGRAVS TTMAAVQILS KLLRDPEVGK YIVPIVPDEA RTFGMDALVP
RIGIYSPRGQ TYTPVDSGSL MVYKESTDGQ MLEEGITEDG AMSSWIAAAT AYANHGVPTI
PFYVFYSMFG MQRIGDLVWA AADQRARGFL FGATAGRTTL AGEGLQHQDG NSLLQAYVVP
TLKVYDPAFA YELAVIVEHG IQRMYVDNID EFYYVTIDNE NEVQPPMPED GRSHDEIRQG
IIRGLYRFQQ SGNKKAKLRA QLLASGPAMG AALEAVQKLE AYGVAADVWS VTSYKELHQD
ALLTQRYNML HPTAEPRVSY VASQLSQENA PGVLVSVSDY VKLGADGLNG HLDRKLWVLG
TDGFGRSEDR SELRDFFEVD ARYVTLATLY ALQREGKLKG DVVARAISEL GIDPEREAPV
LR
|
|---|
| |