| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1852 |
|---|
| Symbol | rplF |
|---|
| ID | 4057582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1957929 |
|---|
| End bp | 1958486 |
|---|
| Gene Length | 558 bp |
|---|
| Protein Length | 185 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641230880 |
|---|
| Product | 50S ribosomal protein L6 |
|---|
| Protein accession | YP_605316 |
|---|
| Protein GI | 94985952 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0097] Ribosomal protein L6P/L9E |
|---|
| TIGRFAM ID | [TIGR03654] ribosomal protein L6, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.668423 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCGTA TTGGTAGACA GCCTATCGCC GTACCCAATG GTGTGACGGT GAACGCCCAG
AACGGCGTGT TTACGGCGAA GGGGCCGAAA GGTGAACTGA GCGTTCCCTA CAACACGGCC
CTCAACATCA CGCAAGAAAA CGGGCAGCTG CTTGTCACGC GCCCGAGCGA CCGCCAGGAG
CACCGCGCCC TGCATGGCCT GACTCGCACG CTGGTGGCCA ACGCCGTCAA GGGCGTGAGC
GACGGCTACA CCATCAATCT GGAACTGCGT GGTGTTGGTT ACCGTGCTCG CCTGGTGGGG
AAGAACCTCG AACTGACCAT CGGTTACAGC CACCCGGTCG TCATTGAGCC GCCCGCTGGC
GTAACCTTTG CTGTGCCCGA ACCCACCCGG ATCGACGTCA TGGGCATCGA CAAGCAGCTG
GTCGGTCAGG TCGCCGCGAA TGTCCGCAAG GTCCGCAAGC CCGACGCCTA CCACGGCAAG
GGTGTGCGCT TTGTCGGCGA ACAGATCGCC CTCAAGGCCG GTAAGGCTGG CGCTACGGGC
GGGAAAGGGA AGAAGTAA
|
|---|
| Protein sequence | MSRIGRQPIA VPNGVTVNAQ NGVFTAKGPK GELSVPYNTA LNITQENGQL LVTRPSDRQE
HRALHGLTRT LVANAVKGVS DGYTINLELR GVGYRARLVG KNLELTIGYS HPVVIEPPAG
VTFAVPEPTR IDVMGIDKQL VGQVAANVRK VRKPDAYHGK GVRFVGEQIA LKAGKAGATG
GKGKK
|
|---|
| |