| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1851 |
|---|
| Symbol | rplR |
|---|
| ID | 4057581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1957591 |
|---|
| End bp | 1957929 |
|---|
| Gene Length | 339 bp |
|---|
| Protein Length | 112 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641230879 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_605315 |
|---|
| Protein GI | 94985951 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.662264 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCAGTC AGACCGCCAT TCGGCGCAAG TTGCGCGCCC GCCGTAAGGT GCGCGAGGCT
GCCGGGGAGC GCCCCCGCCT CAGCGTGTTC CGCTCCAACA AGCACATCTA CGCCCAGATC
ATTGACGACC GCTCGGGCAC GACGCTGGCT GCTGCCAGCA GCAGCGCCGT CAAGACGGGC
ACCAAGACCG ACACCGCCGC TGCGGTCGGC CGGGCACTCG CCGAAGCCGC CGTCGCCAAG
GGTGTGAAGC AGGTCGTATT CGACCGCGGC GCGTACAAGT ACCACGGCCG CGTAAAGGCG
CTTGCAGAAG CAGCGCGGGA GGGTGGCCTT GACTTTTAA
|
|---|
| Protein sequence | MASQTAIRRK LRARRKVREA AGERPRLSVF RSNKHIYAQI IDDRSGTTLA AASSSAVKTG
TKTDTAAAVG RALAEAAVAK GVKQVVFDRG AYKYHGRVKA LAEAAREGGL DF
|
|---|
| |