| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1841 |
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| Symbol | rpsD |
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| ID | 4057571 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 1952178 |
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| End bp | 1952798 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641230869 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_605305 |
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| Protein GI | 94985941 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.470668 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.674871 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGGTCGTT TCCGTGGTTC GATCACCAAG CTCAGCCGCC GCGAAGGCAT CAACCTCGCG
GAGACTGAAA AAGTTCAGAA GTACCTCGAC CGCCGTCCCT ACGCGCCGGG CCAACACGGT
CAGCGCCGCG GGCGTGGTCG CCCCAGCGAC TACAGTGTGC GCCTGCGTGA AAAGCAGAAG
CTCGCGCGCC TGTATGGGGT GAATGAGAAG CAGTTCCGTA ACCTTTTTGA GGAAGCGGCA
AACGTGCCCG GCGTGACCGG CACGGTGTTC CTGCAGCTGC TGGAGCGCCG CCTCGACAAT
GTCGTGTTCC GCATGGGGTT TGCCTCGACC CGCCGTCAGG CCCGGCAGTT TGTGGGTCAC
GGTCACATCC TGGTCAACGG CAAGCGCGTG GATATTCCCA GCTACCGAGT CCGGATCGGT
GATGAGATCA GCGTGGCCGA GGGCAGCCGC AGCATGGGCT TTATCCAGGA AAACATGGAA
GCGCAGAAGC GGCGCCGCGT GAGCCCCTGG ATTGAGCTGA ACCCTGACAC CTTTACCGGC
ACCTTCGTGC GCCTGCCTGC GCGCGAGGAT CTCGCACTGC CGATCAACGA GAACTTCATC
ATCGAGTATT ACTCGCGCTA A
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| Protein sequence | MGRFRGSITK LSRREGINLA ETEKVQKYLD RRPYAPGQHG QRRGRGRPSD YSVRLREKQK
LARLYGVNEK QFRNLFEEAA NVPGVTGTVF LQLLERRLDN VVFRMGFAST RRQARQFVGH
GHILVNGKRV DIPSYRVRIG DEISVAEGSR SMGFIQENME AQKRRRVSPW IELNPDTFTG
TFVRLPARED LALPINENFI IEYYSR
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