| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1725 |
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| Symbol | |
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| ID | 4058345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1833429 |
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| End bp | 1834607 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641230748 |
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| Product | type IV pilus assembly protein PilM |
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| Protein accession | YP_605189 |
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| Protein GI | 94985825 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01174] cell division protein FtsA
[TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0148781 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAGCT TGTTCCAACG CCTACTGAAT CCGCGCCCGA GCGCCATCGG TGTGGAAATC
GGCACCAGCA CCATCAAGGT GGTGGCCCTG CGCCCCGGCA CGCCGCCGGT CCTCCAGCAT
GCGGTGATGG TCCCCACGCC CATCGGCAGC ATGCGCGACG GCCTGGTGAT CGAGCCGCAG
GCGGTCGCCA ACGAGCTGAA GAACCTGCTG GCCGAACACC GCATCACGGC CCGCCACGCC
GTCACCGCCG TGCCCAACCA GTCGGCGGTG ACCCGCAACA TCATGGTTCC GCGCATGGAG
CGCAAGGATC TCCAGGAAGC CATCAAGTGG GAGGCAGAGC GCTATCTCCC CTACCCCATC
GATGAGGTCA ATTTGGATTT TGACCTGCTC GACGATCCCG CCACCATCCC CGAAGACGGG
CAGATGGAGG CGGTGATTGC TGCCGCTCCC AGCGAAGCGG TGGCGCGCCA GGTGGAGGTG
CTGCGGCTGG CAGGCCTGGA ACCCATCATC GTCGACCTCA AGAGCTTCGC GGCACTGCGT
GCCCTGCGCG GCAACCTGCT GGGCGAACAC CTCAACAAGA CCACGCTGGC GGGCCTGAAC
TACACCGAGG CAGGCGAGGT GGCGCTGGTT CTGGAGATCG GCGCAAGCAG CAGCGTGATC
AGTCTGGTAC GTGGCGACCG CATCCTCATG GCACGCAACA TCGCCATTGC CGCCGACGAC
TTCACCACCG CACTGCAAAA AGCCTTTGAC CTGGACTTCA GCGCTGCGGA GGAGGTCAAG
CTGGGCTACG CGACCGCTAT CACGCCCACC GAGGACGAGG AGGCCTTGCT GGATTTCGAC
CGCGCCCGCG AGCAGTACAG CCCGGCGCGC GTGTTTGAGG TGATCCGTCC GGTGCTGGGC
GACCTGATCA CCGAGATTCG CCGCTCGCTG GAGTTCTACC GGGTGCAGTC GGGCGACGTG
GTGATTGATC GGACCTTTAT CGCGGGTGGC GGTGCCAAAC TGCGTGGCCT CGCCAATGCG
ATTAGCGATG CGCTGGGGTT CCGGGTGGAG GTCGGCAGTC CCTGGCTGAC GGTGCAGACC
GAACAGGCCA ATGCCGATAC CGGCTATCTC CAGGCCAACG CACCCGAGTT CACCGTGCCG
CTGGGGCTGG CGCTGCGGGG AGTCCAGGGT CATGGTTGA
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| Protein sequence | MSSLFQRLLN PRPSAIGVEI GTSTIKVVAL RPGTPPVLQH AVMVPTPIGS MRDGLVIEPQ
AVANELKNLL AEHRITARHA VTAVPNQSAV TRNIMVPRME RKDLQEAIKW EAERYLPYPI
DEVNLDFDLL DDPATIPEDG QMEAVIAAAP SEAVARQVEV LRLAGLEPII VDLKSFAALR
ALRGNLLGEH LNKTTLAGLN YTEAGEVALV LEIGASSSVI SLVRGDRILM ARNIAIAADD
FTTALQKAFD LDFSAAEEVK LGYATAITPT EDEEALLDFD RAREQYSPAR VFEVIRPVLG
DLITEIRRSL EFYRVQSGDV VIDRTFIAGG GAKLRGLANA ISDALGFRVE VGSPWLTVQT
EQANADTGYL QANAPEFTVP LGLALRGVQG HG
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