Gene Dgeo_1629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1629 
Symbol 
ID4057320 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1732554 
End bp1733309 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID641230652 
Producthypothetical protein 
Protein accessionYP_605093 
Protein GI94985729 
COG category[S] Function unknown 
COG ID[COG2013] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.630619 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAGTC CTGACGGCAG TTACAGTCTG CGCGACTTCT TGGCCCAGAC CGCCGAACGC 
GACCAGCCCG GCGAAGTGTT CGAGCTTGAA AGCAGCAAGA TGCTGGAGGT CAAGGTCCAA
GGCCGCGTCT GGAGCAAATT GGGCGCGATG GTGGCCTACA AGGGTAACCT CTCCTTTAAG
CGCGAGGGCA CCCTGGAAGG CGGCCTGATG AAAGCCCTCA AGCGCGCGGT GAGCCAGGAG
ATGAGTCCGC TCGCCAAGAT CGAGGGCCGC GGCGTGGCCT ATCTGGCCGA CCAGGGCAAG
GAGATCCAGA TTCTGCGTCT GGCGGGAGAC AGCCTGAACG TCAACGGCAA CGACCTGCTG
GCCTTTGAAG ACAGCGTGCA GTACGACATC ACCATGCAGC GCCGCATGGC GGGCATGGCG
GCAGGCGGCT TATTTAGCGT GCGCCTGTGG GGCAGCGGGC TGGTGGCGAT CCTCAGCCAC
GGCAAGCCGC TCACCCTGCG CGTTACGCCC CACGAGCCGA TCTTTACCGA CCCCAACGCG
ACCGTGGCCT GGAGCGGGAA TCTCCAGCCG CAGCTGCGCA TGGACGCCAG CCTGCGCTCG
ATCTTCGGAC GCGGCGGCGG CGAGACGTAC CAGATGGTTT TCCAGGGAGA CGGCTTCGTG
GTCGTGCAGC CCTACGAGGA GTTCGAGCAG GGCCTGGGCG GCGAAGAGAG CCATGGCGGC
GGGGTCGGCC GCAGCATTGG CGACCTGTTC GACTGA
 
Protein sequence
MTSPDGSYSL RDFLAQTAER DQPGEVFELE SSKMLEVKVQ GRVWSKLGAM VAYKGNLSFK 
REGTLEGGLM KALKRAVSQE MSPLAKIEGR GVAYLADQGK EIQILRLAGD SLNVNGNDLL
AFEDSVQYDI TMQRRMAGMA AGGLFSVRLW GSGLVAILSH GKPLTLRVTP HEPIFTDPNA
TVAWSGNLQP QLRMDASLRS IFGRGGGETY QMVFQGDGFV VVQPYEEFEQ GLGGEESHGG
GVGRSIGDLF D