Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1572 |
Symbol | |
ID | 4057263 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1671359 |
End bp | 1672498 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641230593 |
Product | bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismate mutase |
Protein accession | YP_605036 |
Protein GI | 94985672 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1605] Chorismate mutase [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase [TIGR01801] chorismate mutase domain of gram positive AroA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.829295 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACTAGCG GTGTGAGGCC AGAACACGAA GCGCTTTTCT ACACTGGCCG CATGACCCAA CGCAGTATCG ACGACCTCCG CGCCGAGGTC GATGCCATCA ACCGTGACCT TCTGACCCTG CTCTCGCGCC GTGGCGAGGT GGTCGCGCAG ATCGGCCGGG CCAAAACCCA GGAGGGCCGC CCGCAGCACT ACGATCCCGC CCGCGAGGAA CAGCAGCTGC GCGTGCTGGA GCAGCTGAAC CCTGGCCCCT TCACGAGCGC CGCCGTCAAG GCCATCTTCA AGGAAATTTT CAAGGCCAGC CTGGACCTTG AGGAGAGCAA CGACAAAAAG CAGCTGCTGG TGTCACGTAA GGTCAAACCC GAGGACACCC AGCTCGACAT CGACGGCGTC CGCATCGGCG GGGGCGCCCC GCCCGTCGTG ATTGCGGGGC CCTGCTCCAT CGAGTCGGAA GAGCAGATGG AGGAGACGGC CCGTTTCCTG GCCTCGCGCG GCGTGAAGAT CCTGCGCGGC GGTGCCTACA AACCCCGCAC CAGTCCCTAC GGCTTCCAGG GCATGGGCGT GGACGGCTTG ATCATCGGCG GGCGGGCGGC GCGCGAGAAT GGCATGCTCT TTGTGACCGA AGTGATGGAC ACCCGCGATG TGGAGGTCGT GGCCGAGCAC GCCGACATCC TCCAGGTGGG CGCGCGCAAC ATGCACAACT TCAGCCTGCT CCGTGAAGTG GGCCGCGCCC GGCGCCCGGT GCTGCTCAAG CGCGGCCTGA GCGCCACCAT CGAAGAGTGG CTCTATGCCG CCGAGTACAT CCTCTCGGAG GGGAACCCCG AAGTGATCCT CTGCGAGCGC GGCATTCGCA CCTTTGAGAA GTGGACCCGC AACACCCTCG ACCTCTCGGC GGTGGCTCTT GCCAAGCAGG AGACGCACCT CCCGGTCATC GTGGACGTGA CGCACGCCGC CGGACGCCGC GACCTGCTGA TCCCGCTTGC CAGAGCCGCC CTTGCCGTCG GCGCCGACGG CATCCACGTC GAGGTCCACC CCAGCCCCGC CACCGCCCTG AGCGACAACG AGCAGCAGCT CGACTTCGCG GGGTACGACC GCTTCCTCGA CGCGCTGGCG CCACTGCTCA AGGTGGCCGC GACCGTCTGA
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Protein sequence | MTSGVRPEHE ALFYTGRMTQ RSIDDLRAEV DAINRDLLTL LSRRGEVVAQ IGRAKTQEGR PQHYDPAREE QQLRVLEQLN PGPFTSAAVK AIFKEIFKAS LDLEESNDKK QLLVSRKVKP EDTQLDIDGV RIGGGAPPVV IAGPCSIESE EQMEETARFL ASRGVKILRG GAYKPRTSPY GFQGMGVDGL IIGGRAAREN GMLFVTEVMD TRDVEVVAEH ADILQVGARN MHNFSLLREV GRARRPVLLK RGLSATIEEW LYAAEYILSE GNPEVILCER GIRTFEKWTR NTLDLSAVAL AKQETHLPVI VDVTHAAGRR DLLIPLARAA LAVGADGIHV EVHPSPATAL SDNEQQLDFA GYDRFLDALA PLLKVAATV
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