Gene Dgeo_1513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1513 
SymbolrecR 
ID4057399 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1606288 
End bp1606956 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content68% 
IMG OID641230533 
Productrecombination protein RecR 
Protein accessionYP_604977 
Protein GI94985613 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0279848 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.919824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATATC CGCCTTCGCT GGTGGGGCTG ATCCGGGAAC TCTCGCGCCT GCCCGGCATC 
GGGCCGAAAA GCGCGCAGCG GCTGGCCTTT TATCTGTTCG AGCAGCCACG AGAAGACATC
GAGCGGCTGG CCGGAGCAAT CTTGGAGGCC AAGCGCGACC TGCACACCTG CCCGGTCTGT
TTCAACATTA CCGACGCGGA ACGCTGTGAC GTGTGCAGCG ACCCCACGCG CGATCAGAGC
GTGATTTGCG TGGTGGAAGA ACCCGGCGAC GTGATCGCCA TCGAGCGCAG CGGCGAGTAC
CGCGGGCTGT ACCACGTGCT GCACGGCGCC CTAAGTCCGA TGAACGGCGT GGGGCCGGAC
CGGCTGCAGA TCCGCCCCCT ACTGCCGCGG GTGCAGGACG GCATGGAGGT GATCCTGGCG
ACCGGCACGA CGGTGGAGGG CGACGCAACC GCGCTCTATC TCCAGCGCCT GCTGGAGCCG
CTGGGTGCAG TGGTGAGCCG CATCGCCTAC GGGCTGCCGG TGGGCGGCGC GCTGGAATAC
GCCGATGAGG TGACGCTGGG CCGCGCCCTG AGCGGTAGGC GGCGGGTGAG TGAACCGGCC
TCCCCGCCAC CGCCCCGCCG CAACGATGAG GAGCAAGACG GCGCTCCCGC TCGGCCCCCG
TCCCATTAG
 
Protein sequence
MKYPPSLVGL IRELSRLPGI GPKSAQRLAF YLFEQPREDI ERLAGAILEA KRDLHTCPVC 
FNITDAERCD VCSDPTRDQS VICVVEEPGD VIAIERSGEY RGLYHVLHGA LSPMNGVGPD
RLQIRPLLPR VQDGMEVILA TGTTVEGDAT ALYLQRLLEP LGAVVSRIAY GLPVGGALEY
ADEVTLGRAL SGRRRVSEPA SPPPPRRNDE EQDGAPARPP SH