Gene Dgeo_1484 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1484 
Symbol 
ID4057370 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1570027 
End bp1570275 
Gene Length249 bp 
Protein Length82 aa 
Translation table11 
GC content66% 
IMG OID641230502 
Producthypothetical protein 
Protein accessionYP_604948 
Protein GI94985584 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00652286 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.748996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCGCA TGAAGACCGA TCCTGTAGAC CTGACCCTGT TTCTGGCACA GAGCGTGGTG 
GATCAGCCGT CGCTTGTGCG GGTGTCCCGG CGCGGACCAA CCGTGATTGT GCGTGTAGGC
CCGGGTGAGG AAGGCCGCCT GATTGGACGG CAGGGGCGCG TGATCCAGGC GATTCGTACG
CTGGTGCGCG CGGCCAGTGA TCCCCACGAG CGCGTGAATG TGGACCTCGA CGCGCCCCGC
AAGCCGTGA
 
Protein sequence
MPRMKTDPVD LTLFLAQSVV DQPSLVRVSR RGPTVIVRVG PGEEGRLIGR QGRVIQAIRT 
LVRAASDPHE RVNVDLDAPR KP