Gene Dgeo_1413 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1413 
Symbol 
ID4059046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1498319 
End bp1499062 
Gene Length744 bp 
Protein Length247 aa 
Translation table11 
GC content70% 
IMG OID641230429 
ProductABC transporter related 
Protein accessionYP_604877 
Protein GI94985513 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.139475 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCCA CGATGCCCCG TTCCGCCACC TCTGCCAGTG CCGTGCCCCA GGGCATCCAA 
CTGACGCTCG ACGGTGTCAT GTACCGCTAT GGGCGCAGTC ACGCCGGTGT CGGCCCCCTC
GACCTCAGGG TCAATGCGGG CGAGTTTCTG TGCGTCGTCG GCCCCTCGGG AAGCGGCAAA
AGCACGCTGC TCTCGCTGCT GGCAGGCTTC CTGCGCCCCC AGGCGGGCGA GATCCTGCTG
GGCGACACGC CCGTGCGCGG CCCTGATCCC CGCCTGACCC TGGTGCAGCA GGAAGCGGCC
CTCTTCCCCT GGCGTACCGT CGCAGGAAAT GTTGCGTTCG GCCTAGAGCG CCAGCGCCTC
CCCCGCGCCG AGCGGGACGT CCGCGTGGAG GACACGCTGC GCCTGGTCGG GCTCAGCGGC
TACGGCCCTC GCCGAGTGCA TGAGCTATCG GGCGGCCAGC GCCAGCGCGT CAGCCTCGCG
CGGGCGCTCG CGGTGCGGCC CCAGCTGCTG CTCCTCGACG AGCCGTTTAG CGCACTCGAC
GACCGCACCC GCACCGTCCT CTCCGAGGAG CTCCTGAGCA TCTGGTGGTC CCAAAAGGTC
ACGGTGGTCT TTGTTACCCA CAACCTGGAA GAAGCCCTGG CACTGGGCCA GCGCGTGGTG
GCCCTGCGCG GCGGCCAAAT TGTGCTTGAC GGACCAGCGC GGGAGCTGGA CGTGGGGCAG
CTGCGGGAAA CGCTGGAGGA GTAG
 
Protein sequence
MTATMPRSAT SASAVPQGIQ LTLDGVMYRY GRSHAGVGPL DLRVNAGEFL CVVGPSGSGK 
STLLSLLAGF LRPQAGEILL GDTPVRGPDP RLTLVQQEAA LFPWRTVAGN VAFGLERQRL
PRAERDVRVE DTLRLVGLSG YGPRRVHELS GGQRQRVSLA RALAVRPQLL LLDEPFSALD
DRTRTVLSEE LLSIWWSQKV TVVFVTHNLE EALALGQRVV ALRGGQIVLD GPARELDVGQ
LRETLEE