Gene Dgeo_1409 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1409 
Symbol 
ID4059042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1494476 
End bp1495195 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content68% 
IMG OID641230425 
Productphosphoadenosine phosphosulfate reductase 
Protein accessionYP_604873 
Protein GI94985509 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0175] 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes 
TIGRFAM ID[TIGR00434] phosophoadenylyl-sulfate reductase (thioredoxin) 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.483599 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCGC TGGAAGACCG TTCACCGGCC AGTCGCCGGA CGCCACCTGA CCTCCCCACC 
TTCACGCCCG AGACCGATCC CCTCGACGTG GTCCGCTGGG CACTCAAAGC CCACCCCGAC
CTGCTGATGC CGAGTGCCTT TAACCTCAAC GGCGTGGTGC TGCTCGACCT CGCGGCGCGG
GCGGGGTACC GGGGCGAGGT GGTGTTCGTG GACACCGGCT TCCACTTTCC GGAAACGCTC
GCCACCCGCG ACCGCCTCGC AGCGCGTTAC CCCGAGATGA CGTTCGTCAC GCTCCATGCG
GGCGCGCACC CCGAAGACGG GCAGACGCCG CCCGACCTCT ACGCCAGCGA CCCCGACGCC
TGCTGCGCCG TTCGCAAAGT GACGCCCCTG CAGGCCTATC TGCACAAAAA AGCCCCCTCT
GCCCTGCTGA ACGCCCGCAG CCGTGATCAG GCCGCAACGC GCGCCGATAT CCCCTTTGTT
GAAACCGGCG GCACCCGTGT CAAGATCAAT CCCCTCGCCT ACTGGACCCG TGAGCGGCTA
GAAACCTACG CCCGCGAACA CGACCTGCCG GTTAACCCGC TCTACTGGGA CGGCTTTCTC
AGCATCGGCT GCTGGCCCTG TACCCGCGCG GTCCGCCCCG GCGAAGACGC CCGCGCAGGC
CGCTGGGCCG GCAAGGGCAA GACCGAATGC GGGCTGTGGG CAGGAGACAA CCGACTCTAA
 
Protein sequence
MTALEDRSPA SRRTPPDLPT FTPETDPLDV VRWALKAHPD LLMPSAFNLN GVVLLDLAAR 
AGYRGEVVFV DTGFHFPETL ATRDRLAARY PEMTFVTLHA GAHPEDGQTP PDLYASDPDA
CCAVRKVTPL QAYLHKKAPS ALLNARSRDQ AATRADIPFV ETGGTRVKIN PLAYWTRERL
ETYAREHDLP VNPLYWDGFL SIGCWPCTRA VRPGEDARAG RWAGKGKTEC GLWAGDNRL