Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1340 |
Symbol | |
ID | 4056972 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1426160 |
End bp | 1427188 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641230354 |
Product | oligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein |
Protein accession | YP_604804 |
Protein GI | 94985440 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.801873 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCA CCATTGCAAC GGTGGGGACC AATGCCCAGC GCGCGATGCC CGCAACGGGC GAGACGCTGC TGGACGTGCG GAACCTGGAA AAGTACTTCC CGATTCGTGG TGGCCTGCTT TCGCGCGTGG TCGGCAATGT GAAGGCCGTC AATGACGTGT CCTTTAAGCT GAGCCGCGGC GAGGTGGTCG GTCTGGTGGG TGAATCCGGC TCTGGCAAGA CCACCGCAGG GCGCGCCATC CTGCGCCTGA TCGAGCCGAC CGGCGGCCAG GTGATCTTCA ACGGGACCGA CATCACCAAG CTCAGCAAGA GCCAGATGCG CGACTACCGC CGGGAGATGC AGATCATCTT CCAGGATCCT TTCGCCAGCC TCAACCCCCG CATGACGGTG GCCGACATCA TCGGCGAGGC GATGCAGATC CACAACCTGC ATCCCGGCAA GGAGCGCATC GAGCGCATCG CTGAGCTGCT GGAAAAAGTC GGCTTGAGGC CCGAGCACAT GCGCCGGTAT CCGCACGAGT TCTCGGGCGG CCAGCGCCAG CGCATCGGCA TTGCCCGCGC CCTGGCGGTG AATCCCTCCT TTGTCGTGGC CGATGAGCCG GTGTCGGCGC TGGACGTCTC GATTCAGGCC CAGGTGGTCA ACCTGCTGCA AGACCTCCAG GAGGAACTGG GTCTGACGGT GCTGTTCATC GCGCACGACC TGGCCGTGGT GGAGTACATC TGCGACCGCA TCATCGTGAT GTACCTGGGC CGTGTCATGG AGATCGCCTC CAGCCGCGAA CTCAACACCA ACCCCAAGCA TCCCTACACC GAGGCTCTGC TCTCGGCGGC GCCGATTCCC GATCCCACCG TCAAGCGCCA GCGCATTATC CTCGAAGGCG ATATCCCCAG CCCAATCAAT CCGCCCTCGG GCTGTGTCTT CCGCACGCGC TGCCGCTACG CCATCGACGA CTGCGCGCGC GTGGTCCCCG AACTGCGCGA AGTCGCCCCC GGCCACTTCA AGGCCTGCAT CCGCGACGAT ATTCTTTAA
|
Protein sequence | MTTTIATVGT NAQRAMPATG ETLLDVRNLE KYFPIRGGLL SRVVGNVKAV NDVSFKLSRG EVVGLVGESG SGKTTAGRAI LRLIEPTGGQ VIFNGTDITK LSKSQMRDYR REMQIIFQDP FASLNPRMTV ADIIGEAMQI HNLHPGKERI ERIAELLEKV GLRPEHMRRY PHEFSGGQRQ RIGIARALAV NPSFVVADEP VSALDVSIQA QVVNLLQDLQ EELGLTVLFI AHDLAVVEYI CDRIIVMYLG RVMEIASSRE LNTNPKHPYT EALLSAAPIP DPTVKRQRII LEGDIPSPIN PPSGCVFRTR CRYAIDDCAR VVPELREVAP GHFKACIRDD IL
|
| |