Gene Dgeo_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1340 
Symbol 
ID4056972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1426160 
End bp1427188 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content64% 
IMG OID641230354 
Productoligopeptide/dipeptide ABC transporter, ATP-binding protein-like protein 
Protein accessionYP_604804 
Protein GI94985440 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.801873 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCATTGCAAC GGTGGGGACC AATGCCCAGC GCGCGATGCC CGCAACGGGC 
GAGACGCTGC TGGACGTGCG GAACCTGGAA AAGTACTTCC CGATTCGTGG TGGCCTGCTT
TCGCGCGTGG TCGGCAATGT GAAGGCCGTC AATGACGTGT CCTTTAAGCT GAGCCGCGGC
GAGGTGGTCG GTCTGGTGGG TGAATCCGGC TCTGGCAAGA CCACCGCAGG GCGCGCCATC
CTGCGCCTGA TCGAGCCGAC CGGCGGCCAG GTGATCTTCA ACGGGACCGA CATCACCAAG
CTCAGCAAGA GCCAGATGCG CGACTACCGC CGGGAGATGC AGATCATCTT CCAGGATCCT
TTCGCCAGCC TCAACCCCCG CATGACGGTG GCCGACATCA TCGGCGAGGC GATGCAGATC
CACAACCTGC ATCCCGGCAA GGAGCGCATC GAGCGCATCG CTGAGCTGCT GGAAAAAGTC
GGCTTGAGGC CCGAGCACAT GCGCCGGTAT CCGCACGAGT TCTCGGGCGG CCAGCGCCAG
CGCATCGGCA TTGCCCGCGC CCTGGCGGTG AATCCCTCCT TTGTCGTGGC CGATGAGCCG
GTGTCGGCGC TGGACGTCTC GATTCAGGCC CAGGTGGTCA ACCTGCTGCA AGACCTCCAG
GAGGAACTGG GTCTGACGGT GCTGTTCATC GCGCACGACC TGGCCGTGGT GGAGTACATC
TGCGACCGCA TCATCGTGAT GTACCTGGGC CGTGTCATGG AGATCGCCTC CAGCCGCGAA
CTCAACACCA ACCCCAAGCA TCCCTACACC GAGGCTCTGC TCTCGGCGGC GCCGATTCCC
GATCCCACCG TCAAGCGCCA GCGCATTATC CTCGAAGGCG ATATCCCCAG CCCAATCAAT
CCGCCCTCGG GCTGTGTCTT CCGCACGCGC TGCCGCTACG CCATCGACGA CTGCGCGCGC
GTGGTCCCCG AACTGCGCGA AGTCGCCCCC GGCCACTTCA AGGCCTGCAT CCGCGACGAT
ATTCTTTAA
 
Protein sequence
MTTTIATVGT NAQRAMPATG ETLLDVRNLE KYFPIRGGLL SRVVGNVKAV NDVSFKLSRG 
EVVGLVGESG SGKTTAGRAI LRLIEPTGGQ VIFNGTDITK LSKSQMRDYR REMQIIFQDP
FASLNPRMTV ADIIGEAMQI HNLHPGKERI ERIAELLEKV GLRPEHMRRY PHEFSGGQRQ
RIGIARALAV NPSFVVADEP VSALDVSIQA QVVNLLQDLQ EELGLTVLFI AHDLAVVEYI
CDRIIVMYLG RVMEIASSRE LNTNPKHPYT EALLSAAPIP DPTVKRQRII LEGDIPSPIN
PPSGCVFRTR CRYAIDDCAR VVPELREVAP GHFKACIRDD IL