Gene Dgeo_1334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1334 
Symbol 
ID4056967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1417889 
End bp1418800 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content67% 
IMG OID641230349 
Productprephenate dehydratase 
Protein accessionYP_604799 
Protein GI94985435 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0077] Prephenate dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGGCA AGGGGCAAGT GCGGGACAAG GCAGAACAGG CCGAGGTGAA CGTCCGGGCG 
CATCCGCCCC ACCTCACCGT CGCCTTTCAG GGCAACCCCG GCGCGTATGG CGAGATCGCC
GCGCTGCACG CCCTAGGAAG TGCGGGCATT CCCCATGCGG GTGTCACCAC GCGCGGCTTT
CCCACCTTTC ACGAGGTCGC GCACGCCGTC GAGACGGGTG AGGCCGACTA CGGCGTGCTG
CCGGTCGAGA ACAGCCTGAT GGGCGCGATC CACCAGGCGA TCGACCTGCT GACCGAGACG
GAGTTGCATG TTGTCGGAGA GGTCGTGGTG CGCGTCACCC ACTGCCTGAT GGCCCTGCCC
GGCGTGCGGA TCGAGGATGT GCGGAAGGTC GCCAGCCAGC AGCCTGCGCT CGATCAATGC
ACCGGCTTGA TCCGCAAGTA CGGCCTGCAA CCCGTGGCAG CACACGACAC CGCCGGAAGC
GCCAAAGATC TTGCCGCACG CGGCGCCCGC GATGAAGCCG CCATCGCCTC CGCGCGCGCC
GCCGAGCTGT ACGGTCTGGA GATCCTGGCC CGCGAGATCG AGGATGAACC CTTCAACTTC
ACCCGCTTCA TGCTCCTCGC GCGCCACGAA CCTGCCCCCG CCGATGTGCC GCACAAGACC
AGTCTGGTGT TCGCCGTGCG CCACACTCCT GGCTTTCTGG TCGAGACGCT CAACGAGTTG
CGCGGCCTCA ACCTCTCGCG CATCGAGTCG CGCCCCCGCC GTGACCGCGC CTGGAGTTAC
CTCATCTATG TGGACATCGA GGGAAACGCC CGCGACCCTC AGGTGGCCCA GGCCCTCGCC
GGAGTGCTCA GAAAGGCCAG TTACGCCAAG ATCATCGGCT CGTATCCGGT GGCGCTGGAG
ACGGTGGGCT AA
 
Protein sequence
MSGKGQVRDK AEQAEVNVRA HPPHLTVAFQ GNPGAYGEIA ALHALGSAGI PHAGVTTRGF 
PTFHEVAHAV ETGEADYGVL PVENSLMGAI HQAIDLLTET ELHVVGEVVV RVTHCLMALP
GVRIEDVRKV ASQQPALDQC TGLIRKYGLQ PVAAHDTAGS AKDLAARGAR DEAAIASARA
AELYGLEILA REIEDEPFNF TRFMLLARHE PAPADVPHKT SLVFAVRHTP GFLVETLNEL
RGLNLSRIES RPRRDRAWSY LIYVDIEGNA RDPQVAQALA GVLRKASYAK IIGSYPVALE
TVG