Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1297 |
Symbol | |
ID | 4057067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1376861 |
End bp | 1377712 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641230311 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_604762 |
Protein GI | 94985398 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0510] Predicted choline kinase involved in LPS biosynthesis |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.199372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | TTGCCTTGCT GCCCCCGCTA TCATGCGCGG GTGACTTCGG GCGGCCTGTC AACTCCGCGT TTTCCCGTGC TGGAAGCCCG CTTCGGACCG CTCACGCCGA TGGACACGGG CATGCAGAGC CGGGTGTACG CGGCGCCCGG TGGCGACGTG GTGGTCAAGG TGTACCGCAC CCAGCGCGGC GAACATCGAC TGGAGGCCCA GAACATGCGC CGCGCCGACC TGGGCGAGTG GGTGGTGGAC ACCGTGGAGG CCGACGGCGT GGAGGCGCTG ATCCTGCGCC GCTTTCCCGG TCACCCGCTG CGCGCCCAGG ACATCCCGGT CGCCCTGCCC CGGCTGCGCG AGATTTTGGC CGCACTCCAC CGCGTTCACG AGGGCCGCGT GGATCTGCAG CGGGTCCGTG AGCGCCTCAA GCGCTTTCGC AGCGCGTTGG CTGCCTATCC GCTCGACGAC CTGTTCGGCG CCGTGGAAGA ACCCCTGGAA CGCGGCCTGC TCGATCAGCC TGCGGCCTTC TGCCACCTCG ACCTCTGGCA CGACAACATT CTCATCGCGC CGGACGGGGA CGTGCTGGTG ATCGACTGGA CGAAGGCAGG CTGGGACGAC CCCCTGCGCG ACATCGCCCT GCTGAAGACC GGCACCCTTG ATCTGCTGGA CCGCGACGCC AGCCTCGACG CCGCCCTCAC CTTCCTGCCC GATCAATCCA CCGCGACCCT CACCCGGCTG CGCGCCTACC TCTCGCTCAC GTATCTGCAC GACCTGTACT GGTTTCTGAT GAACGAACCC TACGAGTTCG ACCGCCAGAG GCGCCTGAAG CTGCCCCGGG CCCGGCACGT GTTGGCGCGG CTGCCTGGGT AG
|
Protein sequence | MPCCPRYHAR VTSGGLSTPR FPVLEARFGP LTPMDTGMQS RVYAAPGGDV VVKVYRTQRG EHRLEAQNMR RADLGEWVVD TVEADGVEAL ILRRFPGHPL RAQDIPVALP RLREILAALH RVHEGRVDLQ RVRERLKRFR SALAAYPLDD LFGAVEEPLE RGLLDQPAAF CHLDLWHDNI LIAPDGDVLV IDWTKAGWDD PLRDIALLKT GTLDLLDRDA SLDAALTFLP DQSTATLTRL RAYLSLTYLH DLYWFLMNEP YEFDRQRRLK LPRARHVLAR LPG
|
| |