| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1296 |
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| Symbol | upp |
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| ID | 4057066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 1376123 |
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| End bp | 1376746 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641230310 |
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| Product | uracil phosphoribosyltransferase |
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| Protein accession | YP_604761 |
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| Protein GI | 94985397 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0035] Uracil phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR01091] uracil phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0490678 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTGACTG TTGTCACCCA TCCGCTCGTC CAGCACAAGC TCTCCCTGAT GCGCGACGTT
CACACCGGCG TCAAGGAATT TCGCGAGCTG GCTGCCGAGG TGTCCATGCT GCTCGCCTAC
GAGGCGATGC GCGACCTCGA ACTGGAACCC ACCCGCCTGC AAACGCCCCT TCAGGAGGGT
GAATTCCCGA TGCTCAGCGG CAAGAAGCTC GCGCTGGTCG CCATCTTGCG CGCGGGGCTG
GTGATGACCG ACGCCATCGT GAATCTGGTG CCTGCCGCGA AGGTGGGTCA CATCGGCCTC
TACCGCGATC CCCAGACCCT CCAGCCCGTC GCCTACTACA ACAAGCTCCC TGCCGACATC
GCGGACCGCC GGGTTTTTCT CACCGATCCG ATGCTGGCCA CCGGGGGCAG CGCCGCCGCA
GCGATCGCGT CCCTGAAGGC GGCCGGCGCT CAGAGCATCA AGCTGATGTC CATCCTCGCC
GCGCCCGAGG GCGTCGCCGC CGTGGAACGC GACCACCCCG ACGTGGAGAT CGTGGTCGCC
GCGGTGGACG AGCGGCTGAA CGACCACGGC TACATCGTGC CGGGCCTAGG GGACGCGGGG
GACCGGATCT ACGGAACCAA ATAG
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| Protein sequence | MLTVVTHPLV QHKLSLMRDV HTGVKEFREL AAEVSMLLAY EAMRDLELEP TRLQTPLQEG
EFPMLSGKKL ALVAILRAGL VMTDAIVNLV PAAKVGHIGL YRDPQTLQPV AYYNKLPADI
ADRRVFLTDP MLATGGSAAA AIASLKAAGA QSIKLMSILA APEGVAAVER DHPDVEIVVA
AVDERLNDHG YIVPGLGDAG DRIYGTK
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