| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1287 |
|---|
| Symbol | |
|---|
| ID | 4057057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 1366534 |
|---|
| End bp | 1367865 |
|---|
| Gene Length | 1332 bp |
|---|
| Protein Length | 443 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641230301 |
|---|
| Product | isocitrate lyase |
|---|
| Protein accession | YP_604752 |
|---|
| Protein GI | 94985388 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2224] Isocitrate lyase |
|---|
| TIGRFAM ID | [TIGR01346] isocitrate lyase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.745788 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCCCCG CCGATCCTCG CCTGCATAGT CCCCGCACCC ACGCCGAAAT TCTGGAAAAG
ACCTGGAAGA CCGAGGAACG CTGGCAGGGG ATCCGCCGCA ACTACTCCGC CGACGAGGTG
GTGCGGTTGC GCGGCAGCCT GCCCATCGAG CACACCCTGG CCCGGCACGG GGCGCAAAAG
CTCTGGCGAC TGATGAAGGA AGAACCCTTC GTGAATGCGC TGGGGGCCCT CACTGGCAAT
CAGGCTGTGC AACAGGTGAA AGCGGGCCTG AAGGCGATCT ACCTCAGTGG CTGGCAGGTG
GCCGCTGACG CCAACAATGC CGGGCAGATG TACCCCGACC AGAGCCTCTA CCCGGCCTCC
TCGGTGCCGG ACGTGGTGCG CCGCATCAAC AACGCGCTGC GCCGCGCCGA TCAGATTCAG
CACTCGGAAG GCAAGGATGA CATCGACTAC TTCGTGCCCA TTGTGGCTGA CGCGGAAGCG
GGCTTCGGTG GTCCCCTCAA CGCCTTTGAA CTCATGAAGG CGATGATTGA GGCAGGCGCA
GCGGGCGTGC ACTTTGAGGA CCAGCTCGCC TCCGAGAAGA AGTGCGGGCA CCTGGGCGGC
AAGGTGCTCG TGCCCACCTC ACAGTTCATC CGCACCCTGA ACGCCGCGCG CCTCGCCGCC
GACGTGTCGG GCGTCCCCAC CGTCCTGATC GCCCGTACCG ATGCCGATGC CGCCAACCTG
CTCACCAGCG ACATCGACGA TAACGACAAG CCCTTCACGA CCGGCGAGCG CACCCCGGAA
GGCTTCTTCT ACGTCCGCCC TGGGATCGAG CAGGCGATCA GCCGCGCCCT CGCCTACGCC
CCCTACGCCG ATGTGCTGTG GTGCGAAACG AGCGTCCCCA ACCTCGAGGA CGCCCGCCGC
TTTGCCGAAG CCGTCCACGC CAAGTTTCCC GGCAAGCTGC TCGCCTACAA CTGTTCTCCC
TCCTTTAACT GGAAGAAGAA CCTCGACGAC GAGACGATTG CCAAATTCCA GCGCGAACTG
GGCGCGATGG GCTACAAGTT CCAGTTCATC ACGCTGGCGG GCTTCCATAG TCTCAACTAC
TCGATGTTCG AGCTGGCCTA CGGCTATGCC CGAAACCAGA TGACGGCCTT CGTGGAGCTT
CAAGAAAAGG AATTTGCGGC CCAGGAGCGG GGCTTCACCG CCGTTAAGCA CCAGCGCGAG
GTGGGCACTG GCTACTTCGA CCTCGTCAGC ACCGCAGCAG GCGGCGGCCA GAGCAGCACC
ACTGCACTGG CAGGCAGTAC CGAGGCGCAG CAGTTCCACG GGGAGAAGGA GGTGGCCGCC
GCCCACGACT GA
|
|---|
| Protein sequence | MTPADPRLHS PRTHAEILEK TWKTEERWQG IRRNYSADEV VRLRGSLPIE HTLARHGAQK
LWRLMKEEPF VNALGALTGN QAVQQVKAGL KAIYLSGWQV AADANNAGQM YPDQSLYPAS
SVPDVVRRIN NALRRADQIQ HSEGKDDIDY FVPIVADAEA GFGGPLNAFE LMKAMIEAGA
AGVHFEDQLA SEKKCGHLGG KVLVPTSQFI RTLNAARLAA DVSGVPTVLI ARTDADAANL
LTSDIDDNDK PFTTGERTPE GFFYVRPGIE QAISRALAYA PYADVLWCET SVPNLEDARR
FAEAVHAKFP GKLLAYNCSP SFNWKKNLDD ETIAKFQREL GAMGYKFQFI TLAGFHSLNY
SMFELAYGYA RNQMTAFVEL QEKEFAAQER GFTAVKHQRE VGTGYFDLVS TAAGGGQSST
TALAGSTEAQ QFHGEKEVAA AHD
|
|---|
| |