Gene Dgeo_1215 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1215 
Symbol 
ID4057725 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1293731 
End bp1295968 
Gene Length2238 bp 
Protein Length745 aa 
Translation table11 
GC content66% 
IMG OID641230230 
ProductATPase AAA-2 
Protein accessionYP_604681 
Protein GI94985317 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.26659 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.784865 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGAT ACGACGACCG TGCCCGCCTC GTGTTCCACT ACGCCCGTGA AGAAGGCAAC 
CGCCTCGGGC ACGCGATGGT CGGCCCCGAA CACCTGTTGC TCGGTCTGAT GCGCGAGGGC
GGCACAGCCG CGACCATTCT CTCCGAGTTT GGTGCTTCGC TCGACGGGTT GCGCCGCCGT
GTCGAGGAGA TCATCGGTCG GGGCGAGGGC AACCGTCTGA ACGACGCCCC GTCCATTACC
CCTCGCGCCC GCCGCGTGAT GGAGCTGGCC TCGGCCGAGG CCCGCTCGCT GGGCGCACAG
GTTACCTCCA CGGAACACAT CCTGCTCGGC ATCATCCGCG AGGGGGACGG GGTGGCCTTC
CGCATCCTGC AAGAACTCAC CAAAGACGTC GATACCATCC GCTGGCGCGT GCTGGCGCAG
GGAGACGGCA GCAGCGGCAA GGCCGCCAAG CCGGTTGCCA CGCCCTTCCT CGACGAGTAC
GGCCGTGACC TCACCAAGCA AGCCCGCGAG GGCAAGCTCG ACCCGGTGAT CGGGCGAAGC
GAGGAAATCC GGCGCGTGAC CCAGATCCTC ACGCGGCGCA CCAAGAACAA CCCGGTCCTG
ATCGGCGACC CGGGCGTGGG CAAGACCGCC ATCGTCGAGG GCCTGGCGCT CGCCATCTTT
GAAAAGCGCA CCCCGCCCAA TCTGCACGGT GTCCGCCTGG TCAGCCTCGA CCTCTCGGGC
GTCGTGGCGG GCACCAAGTA CCGCGGCGAG TTTGAGGAGC GGCTGCGCCA GATCATCGAG
GAACTGCGCA ATGCCAAGGT GATGGCCTTT ATCGACGAGC TGCACACCCT GGTCGGCGCG
GGCGGCGCAG AGGGGACGCT GGACGCGGCG AACATCCTCA AGCCTGCCCT CTCGCGGGGT
GAGATTCAGG TGATCGGCGC CACCACGACC GGCGAGTACC ACCGCTACAT CGAGAAGGAT
GCAGCCCTGG AACGCCGCTT CCAGCCGGTG ATTGTGCTGG AACCCAGCCC AGCCGAGACG
CTCCAGATCC TGCGCGGCCT GCGTCCACGT TACGAGGAAC ACCACGGCGT CCAGATTCCT
GAATCTGCGC TCGAGTTGGC GGTTCGCATC GGGGAACGCT CGCTGCCGGG CCGCAACTTC
CCGGACAAGG CCATTGACCT GATCGACGAG GCCGCCAGCC GCGTTCGATT GAACATGAGC
GTGGGCCTGC CCGTCTCAGA GACCGAGGAC GGTGAGCCGA TGGTGTCGCG CGAGGACATC
GAGAGCGTGA TCAACTCGAT GGGCGGCATC TACTCCGATG AGTCGGCGGG ACAGCTCAGC
GACCTCGAAG AGCAGCTTCA GGAACAGGTC TACGGCCAGC CGGAAGCGAT CAAGGCGCTC
TCCAGTGCTC TGCGCCGCGC CCGAGTGGGC CTGGGCGGAC GCACCCGCGT CTCGGCCAGC
TTCCTGTTCG TCGGCCCCAG CGGAGTCGGC AAGACCCACC TCGCCAAGGC GCTGGCCAAG
ACCCTCTTTG GCTCCGAGCG CTCGCTGATC CGGGTGGACA TGAGTGAGTT CCAGGAGGCG
CACTCCATCT CCAAGCTGAT CGGGTCGCCT CCCGGCTATG TGGGCTTCGA GCAGGGCGGA
CGCCTGACCG AGGCGGTGCG TCGCCAGCCT TTCTCGGTGA TCCTGCTCGA CGAGATCGAA
AAGGCGCACC CGGATGTCTA CAACACCTTC TTGCAGGTGC TGGACGATGG CCGCCTCACC
GACGGGCTGG GCCGCACGGT GGATTTCCGC CGCACCATCA TCATCATGAC GAGCAACACG
GGCTTTAACG TCAACCCCAC CGTGGGCTTC AGCCCGGTCA CTCCCGACAA CAATGCGCCG
CTGCGCAACA TCTTCACCCC CGAATTCCTC GATCGCCTCG ACGATGTGAT CCGCTTCCGC
CCGCTGGGCG AGGACGAACT GGTGCGTGTC GCGCAGCAAC TGCTGGGCGA GATGCGTGAG
GAACTCGCCA GCCGCGAGCT GAACGTCACC TTCGACCCGG CCATCGCCGC CTGGCTGGTG
AGCAAGCTCA AGGCACGTAG CCCCAAGCAC GCCGTCGGTT CCAGCCGGCA GCTGCGCACC
CTGCTGCGCG AGGAGATCGA GGACCCGCTG GCCCTTGAGC TGATTGGTAA CGCGGGTGAG
GAGCTGCGGG TGGTGCTGGG CCAGGATGGC ATCCAGTTCG AGCGCGGCAA GACGGCACCG
CCGCAGATTC TGGCGTAG
 
Protein sequence
MNRYDDRARL VFHYAREEGN RLGHAMVGPE HLLLGLMREG GTAATILSEF GASLDGLRRR 
VEEIIGRGEG NRLNDAPSIT PRARRVMELA SAEARSLGAQ VTSTEHILLG IIREGDGVAF
RILQELTKDV DTIRWRVLAQ GDGSSGKAAK PVATPFLDEY GRDLTKQARE GKLDPVIGRS
EEIRRVTQIL TRRTKNNPVL IGDPGVGKTA IVEGLALAIF EKRTPPNLHG VRLVSLDLSG
VVAGTKYRGE FEERLRQIIE ELRNAKVMAF IDELHTLVGA GGAEGTLDAA NILKPALSRG
EIQVIGATTT GEYHRYIEKD AALERRFQPV IVLEPSPAET LQILRGLRPR YEEHHGVQIP
ESALELAVRI GERSLPGRNF PDKAIDLIDE AASRVRLNMS VGLPVSETED GEPMVSREDI
ESVINSMGGI YSDESAGQLS DLEEQLQEQV YGQPEAIKAL SSALRRARVG LGGRTRVSAS
FLFVGPSGVG KTHLAKALAK TLFGSERSLI RVDMSEFQEA HSISKLIGSP PGYVGFEQGG
RLTEAVRRQP FSVILLDEIE KAHPDVYNTF LQVLDDGRLT DGLGRTVDFR RTIIIMTSNT
GFNVNPTVGF SPVTPDNNAP LRNIFTPEFL DRLDDVIRFR PLGEDELVRV AQQLLGEMRE
ELASRELNVT FDPAIAAWLV SKLKARSPKH AVGSSRQLRT LLREEIEDPL ALELIGNAGE
ELRVVLGQDG IQFERGKTAP PQILA