Gene Dgeo_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1210 
Symbol 
ID4057720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1288683 
End bp1291268 
Gene Length2586 bp 
Protein Length861 aa 
Translation table11 
GC content63% 
IMG OID641230225 
ProductATPase AAA-2 
Protein accessionYP_604676 
Protein GI94985312 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0542] ATPases with chaperone activity, ATP-binding subunit 
TIGRFAM ID[TIGR03346] ATP-dependent chaperone ClpB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0522971 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.881937 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGGCCA TTGAGGAGGA GATCACCTTG AATCCCGAAC GCTTCACTGA GGCTGCCTTG 
CAGGCGATCG CGCAGGCGCA GCAACTCGCA CAAGCCAATC AACAACAAAC CCTGACTGTG
GCGCATGTGC TGCGTGCGCT GCTTGACAAT GACACCGCTG CCCGTGCGCT GAGTGCCGCT
GGGGGCAACC TCCAGGCCAT TCGCCAGGCG CTTGATGCCG AGATTGCCAA ACTGCCGCGC
GTGCAGGGTG GCGGTGAGCA GCTCTATCTT GACCCGGCGT TGAACCGTGC GCTCCAAGGG
GCAGAGAAGC AGGCACAGAC GTTAGGCGAC GCCTTCATTG CCGCTGACAC GCTGCTGCTC
GCACTGCGGG CCGAGAGCCG CACACCCGGC CTGCCCAGCG CGGCGGCCCT GCAGCAAGCT
GTCACTGAGG CCCGGAAAGG AAAGACCGTG ACCACCAAAA CCGCTGAACA ACAATTCGAC
GCGCTGGAAA AATATGGCAC GGACCTGACC CAGCGTGCAC GCGATGGCAA ATTCGACCCG
GTGATCGGAC GCGACGAGGA AATCCGCCGC GTCATGCAGA TCCTCTTGCG GCGGACCAAG
AACAACCCGG TTCTGATTGG TGAACCCGGC GTGGGCAAGA CCGCCATTGT CGAGGGCCTC
GCCATCCGCA TCGTGAAGGG CGACGTGCCC GAGGGCCTGA AGAATAAGCG GATCGTCTCC
TTGGATATGG GCAGCCTGCT CGCGGGGGCC AAGTTCCGCG GTGAGTTTGA GGAACGCCTC
AAGGCCGTGA TCGAGGAGGT GGTGCAGTCC GCAGGCGAGG TCATTCTGTT CGTGGACGAG
CTGCACACCA TCGTCGGTGC GGGCAAGACC GAGGGCAGCC CCGACGCAGG CAATATGCTC
AAACCAGCGC TGGCCCGCGG CGAGCTGCAC ATGATCGGCG CGACCACCCT GAGCGAGTAC
CGCGAGATCG AAAAGGACCC GGCCCTCGAA CGCCGCTTCC AGCCTGTCTT CGTGGACGAG
CCGAGCGTGG AGGACACCAT CTCCATTCTG CGCGGCATCA AGGAAAAGTA TCAGGCGCAC
CACAACGTCA ACCTCACCGA CCCCGCCCTG GTGGCGGCTG CGCAGCTGAG CCACCGCTAC
ATCACGGATC GCCAGCTCCC AGACAAGGCG ATCGACCTGA TCGACGAGGC GGCTGCCCGG
CTGCGAATGG CGCTGGAAAG CAGCCCCGAA CGCATCGATC AGCTCGAGCG GCGCAAGCTG
CAACTGGAGA TCGAGCGCGA GGCCCTGAAG AAGGAAAAGG ATGTTGACTC GCAAAACCGC
CTGCTGGACA TCGAAGACCA GCTCAAGGCG ATCACCGATG AGCTGGCTGA GGTGCGCAGC
CGCTGGGAAG CCGAGCGGCA GGAAGTTCAG GCCCTGCGCG AAAAACGTGA CCAGCTGGAC
CAGGTGCGAA CCGAGATTGA AAAGGCCCGC CGCGAGTACG ATCTCGGCAA GGCGGCCCAG
CTGGAGTACG GCACGCTCCC GCAACTGGAA AAGGACGTGC AAGAGCTGGA GCGCAAGCTC
AAGGCCGCCG AGTTTGCCCA TATGGAAGTC ACGGACGAGG ACATCGCCTC AGTCGTGAGC
CGCTGGACCG GCATTCCGGT CAGCAAGCTG ATGGAGGGCG AGCGCGAGAA ACTGCTGCGC
CTCGAAGAGC AACTCCATGA GCGGGTGATC GGACAAGACC GTGCGATCGT CAGTGTGGCC
GATGCCATTC GCCGCGCTCG AGCAGGCCTG AACGATCCCA ATCGGCCTCT CGGCTCCTTC
ATGTTCCTGG GGCCGACCGG CGTGGGCAAG ACCGAGCTGG CAAAAGCCCT GGCCGAGTTC
CTGTTTGACT CGCCCGACGC GATGATCCGC ATCGACATGA GCGAGTACAT GGAAAAGCAC
TCTGTCGCCC GCTTGATCGG TGCTCCTCCC GGTTACGTGG GGTATGAAGA AGGCGGCCAG
CTGACGGAAG CCGTGCGTCG CCGCCCCTAC TCGGTGATCC TGCTTGACGA GATCGAAAAG
GCGCACCCAG ACGTGTTCAA CGTGCTGCTG CAGGTGCTGG ATGATGGCCG CCTGACCGAT
GGCCAGGGCC GTACGGTGGA CTTCCGCAAC ACGCTGATCA TCATGACGAG CAACATCGGC
TCGCACCTGA TCTTGGAAGC GCAGGCGCGT GGCGACAGCC CCGAGAGCAT TCGCGAGCAG
GTTCTCCAGG TCTTACAGGC ACACTTCCGG CCCGAGTTCC TCAACCGCAT TGACGACATC
ATTGTCTTTG ACGCGCTGAC CCCGGCCAAC CTGCACAAGA TCGTGGAAAT CCAGCTTGGT
GGCCTGCGCC GCCGCCTGGC CGAACGCCGC GTCACACTGC ACCTCACCGA CGCCGCCAAG
GACAAGCTCG CTCAGATCGG CTATGACCCC GCCTTCGGTG CGCGCCCGCT CAAGCGCGTG
ATTGCCCGCG AGATCGAGAC ACCGCTGGCC CGCGAAATCC TGCAGGGCCG CGTGCCGGAA
GGCAGCACCC TGACGGTGGA CTACGACGGG AACCAGTTCC GCTTCGAGAC CGGGGTGCTG
AACTGA
 
Protein sequence
MGAIEEEITL NPERFTEAAL QAIAQAQQLA QANQQQTLTV AHVLRALLDN DTAARALSAA 
GGNLQAIRQA LDAEIAKLPR VQGGGEQLYL DPALNRALQG AEKQAQTLGD AFIAADTLLL
ALRAESRTPG LPSAAALQQA VTEARKGKTV TTKTAEQQFD ALEKYGTDLT QRARDGKFDP
VIGRDEEIRR VMQILLRRTK NNPVLIGEPG VGKTAIVEGL AIRIVKGDVP EGLKNKRIVS
LDMGSLLAGA KFRGEFEERL KAVIEEVVQS AGEVILFVDE LHTIVGAGKT EGSPDAGNML
KPALARGELH MIGATTLSEY REIEKDPALE RRFQPVFVDE PSVEDTISIL RGIKEKYQAH
HNVNLTDPAL VAAAQLSHRY ITDRQLPDKA IDLIDEAAAR LRMALESSPE RIDQLERRKL
QLEIEREALK KEKDVDSQNR LLDIEDQLKA ITDELAEVRS RWEAERQEVQ ALREKRDQLD
QVRTEIEKAR REYDLGKAAQ LEYGTLPQLE KDVQELERKL KAAEFAHMEV TDEDIASVVS
RWTGIPVSKL MEGEREKLLR LEEQLHERVI GQDRAIVSVA DAIRRARAGL NDPNRPLGSF
MFLGPTGVGK TELAKALAEF LFDSPDAMIR IDMSEYMEKH SVARLIGAPP GYVGYEEGGQ
LTEAVRRRPY SVILLDEIEK AHPDVFNVLL QVLDDGRLTD GQGRTVDFRN TLIIMTSNIG
SHLILEAQAR GDSPESIREQ VLQVLQAHFR PEFLNRIDDI IVFDALTPAN LHKIVEIQLG
GLRRRLAERR VTLHLTDAAK DKLAQIGYDP AFGARPLKRV IAREIETPLA REILQGRVPE
GSTLTVDYDG NQFRFETGVL N