Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1210 |
Symbol | |
ID | 4057720 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 1288683 |
End bp | 1291268 |
Gene Length | 2586 bp |
Protein Length | 861 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641230225 |
Product | ATPase AAA-2 |
Protein accession | YP_604676 |
Protein GI | 94985312 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
TIGRFAM ID | [TIGR03346] ATP-dependent chaperone ClpB |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0522971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.881937 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCCA TTGAGGAGGA GATCACCTTG AATCCCGAAC GCTTCACTGA GGCTGCCTTG CAGGCGATCG CGCAGGCGCA GCAACTCGCA CAAGCCAATC AACAACAAAC CCTGACTGTG GCGCATGTGC TGCGTGCGCT GCTTGACAAT GACACCGCTG CCCGTGCGCT GAGTGCCGCT GGGGGCAACC TCCAGGCCAT TCGCCAGGCG CTTGATGCCG AGATTGCCAA ACTGCCGCGC GTGCAGGGTG GCGGTGAGCA GCTCTATCTT GACCCGGCGT TGAACCGTGC GCTCCAAGGG GCAGAGAAGC AGGCACAGAC GTTAGGCGAC GCCTTCATTG CCGCTGACAC GCTGCTGCTC GCACTGCGGG CCGAGAGCCG CACACCCGGC CTGCCCAGCG CGGCGGCCCT GCAGCAAGCT GTCACTGAGG CCCGGAAAGG AAAGACCGTG ACCACCAAAA CCGCTGAACA ACAATTCGAC GCGCTGGAAA AATATGGCAC GGACCTGACC CAGCGTGCAC GCGATGGCAA ATTCGACCCG GTGATCGGAC GCGACGAGGA AATCCGCCGC GTCATGCAGA TCCTCTTGCG GCGGACCAAG AACAACCCGG TTCTGATTGG TGAACCCGGC GTGGGCAAGA CCGCCATTGT CGAGGGCCTC GCCATCCGCA TCGTGAAGGG CGACGTGCCC GAGGGCCTGA AGAATAAGCG GATCGTCTCC TTGGATATGG GCAGCCTGCT CGCGGGGGCC AAGTTCCGCG GTGAGTTTGA GGAACGCCTC AAGGCCGTGA TCGAGGAGGT GGTGCAGTCC GCAGGCGAGG TCATTCTGTT CGTGGACGAG CTGCACACCA TCGTCGGTGC GGGCAAGACC GAGGGCAGCC CCGACGCAGG CAATATGCTC AAACCAGCGC TGGCCCGCGG CGAGCTGCAC ATGATCGGCG CGACCACCCT GAGCGAGTAC CGCGAGATCG AAAAGGACCC GGCCCTCGAA CGCCGCTTCC AGCCTGTCTT CGTGGACGAG CCGAGCGTGG AGGACACCAT CTCCATTCTG CGCGGCATCA AGGAAAAGTA TCAGGCGCAC CACAACGTCA ACCTCACCGA CCCCGCCCTG GTGGCGGCTG CGCAGCTGAG CCACCGCTAC ATCACGGATC GCCAGCTCCC AGACAAGGCG ATCGACCTGA TCGACGAGGC GGCTGCCCGG CTGCGAATGG CGCTGGAAAG CAGCCCCGAA CGCATCGATC AGCTCGAGCG GCGCAAGCTG CAACTGGAGA TCGAGCGCGA GGCCCTGAAG AAGGAAAAGG ATGTTGACTC GCAAAACCGC CTGCTGGACA TCGAAGACCA GCTCAAGGCG ATCACCGATG AGCTGGCTGA GGTGCGCAGC CGCTGGGAAG CCGAGCGGCA GGAAGTTCAG GCCCTGCGCG AAAAACGTGA CCAGCTGGAC CAGGTGCGAA CCGAGATTGA AAAGGCCCGC CGCGAGTACG ATCTCGGCAA GGCGGCCCAG CTGGAGTACG GCACGCTCCC GCAACTGGAA AAGGACGTGC AAGAGCTGGA GCGCAAGCTC AAGGCCGCCG AGTTTGCCCA TATGGAAGTC ACGGACGAGG ACATCGCCTC AGTCGTGAGC CGCTGGACCG GCATTCCGGT CAGCAAGCTG ATGGAGGGCG AGCGCGAGAA ACTGCTGCGC CTCGAAGAGC AACTCCATGA GCGGGTGATC GGACAAGACC GTGCGATCGT CAGTGTGGCC GATGCCATTC GCCGCGCTCG AGCAGGCCTG AACGATCCCA ATCGGCCTCT CGGCTCCTTC ATGTTCCTGG GGCCGACCGG CGTGGGCAAG ACCGAGCTGG CAAAAGCCCT GGCCGAGTTC CTGTTTGACT CGCCCGACGC GATGATCCGC ATCGACATGA GCGAGTACAT GGAAAAGCAC TCTGTCGCCC GCTTGATCGG TGCTCCTCCC GGTTACGTGG GGTATGAAGA AGGCGGCCAG CTGACGGAAG CCGTGCGTCG CCGCCCCTAC TCGGTGATCC TGCTTGACGA GATCGAAAAG GCGCACCCAG ACGTGTTCAA CGTGCTGCTG CAGGTGCTGG ATGATGGCCG CCTGACCGAT GGCCAGGGCC GTACGGTGGA CTTCCGCAAC ACGCTGATCA TCATGACGAG CAACATCGGC TCGCACCTGA TCTTGGAAGC GCAGGCGCGT GGCGACAGCC CCGAGAGCAT TCGCGAGCAG GTTCTCCAGG TCTTACAGGC ACACTTCCGG CCCGAGTTCC TCAACCGCAT TGACGACATC ATTGTCTTTG ACGCGCTGAC CCCGGCCAAC CTGCACAAGA TCGTGGAAAT CCAGCTTGGT GGCCTGCGCC GCCGCCTGGC CGAACGCCGC GTCACACTGC ACCTCACCGA CGCCGCCAAG GACAAGCTCG CTCAGATCGG CTATGACCCC GCCTTCGGTG CGCGCCCGCT CAAGCGCGTG ATTGCCCGCG AGATCGAGAC ACCGCTGGCC CGCGAAATCC TGCAGGGCCG CGTGCCGGAA GGCAGCACCC TGACGGTGGA CTACGACGGG AACCAGTTCC GCTTCGAGAC CGGGGTGCTG AACTGA
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Protein sequence | MGAIEEEITL NPERFTEAAL QAIAQAQQLA QANQQQTLTV AHVLRALLDN DTAARALSAA GGNLQAIRQA LDAEIAKLPR VQGGGEQLYL DPALNRALQG AEKQAQTLGD AFIAADTLLL ALRAESRTPG LPSAAALQQA VTEARKGKTV TTKTAEQQFD ALEKYGTDLT QRARDGKFDP VIGRDEEIRR VMQILLRRTK NNPVLIGEPG VGKTAIVEGL AIRIVKGDVP EGLKNKRIVS LDMGSLLAGA KFRGEFEERL KAVIEEVVQS AGEVILFVDE LHTIVGAGKT EGSPDAGNML KPALARGELH MIGATTLSEY REIEKDPALE RRFQPVFVDE PSVEDTISIL RGIKEKYQAH HNVNLTDPAL VAAAQLSHRY ITDRQLPDKA IDLIDEAAAR LRMALESSPE RIDQLERRKL QLEIEREALK KEKDVDSQNR LLDIEDQLKA ITDELAEVRS RWEAERQEVQ ALREKRDQLD QVRTEIEKAR REYDLGKAAQ LEYGTLPQLE KDVQELERKL KAAEFAHMEV TDEDIASVVS RWTGIPVSKL MEGEREKLLR LEEQLHERVI GQDRAIVSVA DAIRRARAGL NDPNRPLGSF MFLGPTGVGK TELAKALAEF LFDSPDAMIR IDMSEYMEKH SVARLIGAPP GYVGYEEGGQ LTEAVRRRPY SVILLDEIEK AHPDVFNVLL QVLDDGRLTD GQGRTVDFRN TLIIMTSNIG SHLILEAQAR GDSPESIREQ VLQVLQAHFR PEFLNRIDDI IVFDALTPAN LHKIVEIQLG GLRRRLAERR VTLHLTDAAK DKLAQIGYDP AFGARPLKRV IAREIETPLA REILQGRVPE GSTLTVDYDG NQFRFETGVL N
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