Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_1209 |
Symbol | |
ID | 4057719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | + |
Start bp | 1287714 |
End bp | 1288484 |
Gene Length | 771 bp |
Protein Length | 256 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641230224 |
Product | ABC transporter related |
Protein accession | YP_604675 |
Protein GI | 94985311 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.093328 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.473951 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGAAC AAGTGATGGC GGCAACCAGT GGGCAGGGCG TCGCAGCAGC CGTGACGCCG ATGCTGGAGC TGCGTGATGT GCATACCTAC TACGGCCATA TCCACGCCCT CAAGGGTCTG CATCTGACCG TGAACCCCGG CGAGATCGTC GCGCTGATCG GCGGGAACGG CGCGGGCAAG ACAACCACGC TGCGCACCAT CAGTGGCATG ATGAAACCCA AGGTGGGCAG CGTGATCTAT GAGGGTCAGA ACATCACGGG TCTGCCCGCT CATAGCATCA TGCAGCGTGG CATCAGCCAC GTGCCGGAAG GCCGCCGCAT CTTCGGCCAG CTCAGTGTGC GCGAGAACCT GGAGGTGGGC GCGTACACCG TGACCGACCG GGCGGTGATT GAGGAGCGTA TCCAGGAAGC CTTCACGCTG TTTCCCCGTC TCAAGGAACG TGAGACCCAG CTCGGCGGCA CCATGTCGGG CGGCGAGCAG CAGATGCTGG CGATCGCCCG CGCCCTGATG GTCAATCCCC GGCTGCTGCT GCTCGACGAA CCCTCGATGG GTCTCTCGCC CCTCTTTGTG GAGGCGATTT TCGACATCAT CGAGCAGCTG AACAAGGAAC GTGGCACCAC CATCCTGCTC GTTGAGCAAA ACGCGAGCAT GGCCTTGGCG ATTGCCCACC GCGCCTATGT GCTGCAAACC GGCGAGATCC GCCTCAGCGG CACCGCCGCA CAAATCGCGC AGGACGAGAG CGTGCGCAAG GCGTATCTGG GCGACGAGTA A
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Protein sequence | MPEQVMAATS GQGVAAAVTP MLELRDVHTY YGHIHALKGL HLTVNPGEIV ALIGGNGAGK TTTLRTISGM MKPKVGSVIY EGQNITGLPA HSIMQRGISH VPEGRRIFGQ LSVRENLEVG AYTVTDRAVI EERIQEAFTL FPRLKERETQ LGGTMSGGEQ QMLAIARALM VNPRLLLLDE PSMGLSPLFV EAIFDIIEQL NKERGTTILL VEQNASMALA IAHRAYVLQT GEIRLSGTAA QIAQDESVRK AYLGDE
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