| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1205 |
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| Symbol | |
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| ID | 4057715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1282878 |
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| End bp | 1284032 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641230220 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_604671 |
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| Protein GI | 94985307 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00000303202 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.322412 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA CCGCCCTAAG CCTTTCCGTA CTGACCGCCC TTGCTCTGGG CAGTGCCCAC
GCCCAGACAG TGGTCAAGCT CGCCACGCTC ACCCCTCTTT CGGGGGGGCA AAGTGACCTG
GGAACCCAGA TTCGTAACGG CGCCCAGCTC GCCGTGAACG AATACAAGCC GCAGTTCAAG
AAACTGGGCA TGGACCTGCA GCTCATCGCC TTCGACGACC AGGCCGATCC CGCCACAGGC
ACGGCCCAGG CCCGCAAGAT TGCGGCCGAC CGTCAGATTC TTGCGGTGGT GGGCACGCTG
AATAGCGGCG TTGCCATCCC CGCCAGTGCC GCGCTCGCGC CCAGCCATGT GGCGATGATC
AGCCCGGCCA ACACCGCCAA CCAGGTCACG GACCGCGGCC TCAGCAACAT GAACCGCATC
GTTGCCCGTG ACGACGCGCA AGGCCCGGCG GGCGCGAACT TCATCGCGAA TAACCTCAAG
GCCAAGAAGG TCTACATCCT GAACGACAAG ACGGCCTATG GTGAGGGGCT GGCGCAGGAA
GTCGAGAAGG CGCTGAAGGC CAAGGGCGTG CAGGTGATCG CCAATGAGGG CACTGAGGAG
AAGAGTGACT TCTCCTCCAT CATCGCCAAG ATCAAGCTGA ACCGTCCTGA CGCGATCTAC
TTCGGCGGCA TCTACAACCA GGTCGGCGTG TTTATCAAGC AGCTGCGCGA TGCGGGTATT
GACGCTCCTG TGGTCGGCGG CGACGGTCTG GACAGCTCGC AGCTCGCGGT GATCGCTGGC
GCGGGGGCGA ACAACATCTA CTTCACCACG GTGGCCGCGC CCCTGGAGGC TCTGCCTGCC
GCCAAGGTCT TTGCCACCAA CTTCCAGAAG ACCTTTAACC GTCCGGCGCA GGGCTTCGGC
GCCTTCGGCT ATGACGCAGC CAAGGTGGCG CTCCAGGGCA TCCTGAATGC CGTGCGGGCC
AACGGCAACA AGGTGCCCAG CCGCCAGCAG GTGGAAACGG CCATTCGCAA GGGCAGCTAC
ACCGGCCTGC TCTCCGGCAG TGTCAGCTTC AACAGCGAGG GCGACCGCAA GGCGGCCACG
CTCTATGTGA TGAAGGTGGA CAACGGCAAA TACGTGCTGG ACACCAAGAT TCCGGTCAAG
CCCGCCAAGC AGTAA
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| Protein sequence | MKKTALSLSV LTALALGSAH AQTVVKLATL TPLSGGQSDL GTQIRNGAQL AVNEYKPQFK
KLGMDLQLIA FDDQADPATG TAQARKIAAD RQILAVVGTL NSGVAIPASA ALAPSHVAMI
SPANTANQVT DRGLSNMNRI VARDDAQGPA GANFIANNLK AKKVYILNDK TAYGEGLAQE
VEKALKAKGV QVIANEGTEE KSDFSSIIAK IKLNRPDAIY FGGIYNQVGV FIKQLRDAGI
DAPVVGGDGL DSSQLAVIAG AGANNIYFTT VAAPLEALPA AKVFATNFQK TFNRPAQGFG
AFGYDAAKVA LQGILNAVRA NGNKVPSRQQ VETAIRKGSY TGLLSGSVSF NSEGDRKAAT
LYVMKVDNGK YVLDTKIPVK PAKQ
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