| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1177 |
|---|
| Symbol | |
|---|
| ID | 4058793 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | + |
|---|
| Start bp | 1249730 |
|---|
| End bp | 1251064 |
|---|
| Gene Length | 1335 bp |
|---|
| Protein Length | 444 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 641230192 |
|---|
| Product | aminotransferase class-III |
|---|
| Protein accession | YP_604643 |
|---|
| Protein GI | 94985279 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0161] Adenosylmethionine-8-amino-7-oxononanoate aminotransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAATT CCCCCTCCTC CAGCGTCTTC TACCGTTCCC GCAAGCCCTA CCCGACCGCC
GTGCGTGGCG AGGGCGTGTA CCTCTACGAC GCCCAGGGGT GGCGGTATCT GGACGGCTCG
TCGGGCGCGT TGGTGGCGAA CATCGGGCAC GGGCGGGCGG AAGTGGCGGA GGCGATGGCG
CGGCAGGCGC GGGAACTGCC CTTCGTGCAT GGCTCGCAGT TCACCAGTCC GGTGCTGGAG
GAGTACGCCG CGCGGCTCGT GAGCTTCCTG GGGCTGCCCG GTTTCCGCTT CTGGGCCGTC
TCGGGCGGAT CGGAGGCGAA CGAGAGCGCG ATCAAGCTGG CGCGGCAGTA CCACGTGGAA
CGGGGCGAGC CGGGGCGCTA CAAGGTCATC ACGCGGGTGC CGAGCTATCA CGGGGCCTCG
CTGGGGGCGC TGGCCGCGTC GGGGATGGGG GCGCGGCGGG CCATCTACGC GCCGCTGCTG
AACGAGGCCG CCTGGCCGAA GATGCCCAAG CCCGACCCCA CCCTCTCAGG TGAGGCTGAT
GCCGAACGCC TGCGGGCCGT GCTGGAGGAA GCCGGGCCGG AAACGGTGGC CGCCTTCATC
GCGGAGCCGG TGGTCGGGGC ATCGGACGCG GCGCTCGCCC CGAACACGGG CTACCATGCC
CGGCTTGCCG AGATTTGCCG CGAGTACGGC GTCCTCTTCT TGGCCGACGA GGTGATGAGC
GGCATGGGCC GGTGTGGGGC ACCGCTGGCG GTCCGCTTGC ATGACGACGT GACGCCCGAC
ATCGTGGTGC TGGGCAAGGG ACTGGCCGCC GGCTACGCGC CGCTGGCGGG CCTGGCGGCG
AGTCCGGAAG TGTACGACAC GGTGATGAAC GGTTCGGGTG CCTTCAAGCA CGGCTTCACC
TACGCGGGGC ACCCGGTCAG CGTGGCGGCG GGTCTCGCCG TGCTGGACAT CGTGGAACGC
GAGGGGCTGG CCGAGCGGGC GCGGGGGCAG GGGGAGCGGC TGCTGGCCGG GCTGCGGGAA
CTGAAGGAAC GTCATCCAGC CGTGCTGGAA GCGCGGGGCC AGGGGCTGCT GCTGGGCCTG
GTGCTGGGCG ACCCGGCCAC CGGGCAGGCC TTCGGGACGC CGGGCATCGC GGAGCGGGTG
GCAAAGGCGG CCCTGAACCG GGGCCTGATC ACCTACCCCG GCACGGGCGC GGTGGACGGT
ACACGCGGCG ACCACCTGCT CCTCGGTCCG CCCCTGAGCA TCACGGACGC GGAACTGGAG
GAGATGCTGG GCGTGCTGGA CGAGGCACTG GAGGAGGCAG CGAGCGGAGA GGGGCAGCGC
GAGAGATCAC GATAA
|
|---|
| Protein sequence | MTNSPSSSVF YRSRKPYPTA VRGEGVYLYD AQGWRYLDGS SGALVANIGH GRAEVAEAMA
RQARELPFVH GSQFTSPVLE EYAARLVSFL GLPGFRFWAV SGGSEANESA IKLARQYHVE
RGEPGRYKVI TRVPSYHGAS LGALAASGMG ARRAIYAPLL NEAAWPKMPK PDPTLSGEAD
AERLRAVLEE AGPETVAAFI AEPVVGASDA ALAPNTGYHA RLAEICREYG VLFLADEVMS
GMGRCGAPLA VRLHDDVTPD IVVLGKGLAA GYAPLAGLAA SPEVYDTVMN GSGAFKHGFT
YAGHPVSVAA GLAVLDIVER EGLAERARGQ GERLLAGLRE LKERHPAVLE ARGQGLLLGL
VLGDPATGQA FGTPGIAERV AKAALNRGLI TYPGTGAVDG TRGDHLLLGP PLSITDAELE
EMLGVLDEAL EEAASGEGQR ERSR
|
|---|
| |