Gene Dgeo_1170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_1170 
Symbol 
ID4058786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1241889 
End bp1243262 
Gene Length1374 bp 
Protein Length457 aa 
Translation table11 
GC content70% 
IMG OID641230185 
Producthypothetical protein 
Protein accessionYP_604636 
Protein GI94985272 
COG category[C] Energy production and conversion 
COG ID[COG0644] Dehydrogenases (flavoproteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.166116 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCTCC CCTACCGAAC TGAACCCCGC ACCTGGGACG TGATGGTCGC TGGGGGCGGC 
ACCGCCGGGG CCATCGCGGG GGTCGCGGCG GCGCGGGCGG GCGCGCGGGT GCTCGTCGTG
GAGGCGCTGG GGAGTCTGGG CGGCACGGGC ACGAACGCCT GGGTCACGCC CCTGATGCGC
AATGTCTCCG GCGGGCAGAA TCTCAACCGG GGCCTGACGG ACGAACTCAA AGCGCGGCTG
CGCGCGCGGG GCGACGGGGC CAGCGACAAG GGCGGCAACG ACAACTGGTT CAATCCCGAA
GGCCTCAAGG TCGTGCTGGA GAAGATGCTG CTGGAGGCGG GCGGCGAGGT GCTCTACCAC
ACGCAGGTCG TTCTGCCCGT ACTGAACGGT GAACGGGTCG AGGCGCTTGT CCTGCACAAC
AAGGGCGGCC TGCAAGCGTT CCGCGCCGCC GTCTTCATCG ACGCGACGGG CGACGCAGAT
GTGGTGGCGC GGGCGGGTGC GCCCTTTCAG GCAGGCGACG AGGACGGCCT GCATCAGGCG
ATGAGCCTAC GCTTCACCCT GGCGGGGGTG GACACGGGGA GGCTGTGCGC CTTTTTGAAT
GAGCACGGAC AGCCTCAAAC GTCCCCGGAT TTCCTGCACT TCTGGATGGT GTGGGGGCGG
GGATCCAGCC TCGAACCCCT CTTTCGGGAG GCGGTGACGG CGGGCGTGCT GGAGGAGCGC
GACGGGGACT ACTTTCAGGG CTTCAGCGTC CCGGGGCGGC CCGGCGAGAT CAGTTTCAAC
TGCCCACGCA TTCGGGCTGA TCTGAACGAC GGCACCGATC CCTGGCAACT CTCGGCGGCC
CAGACGGACG GGCGGGCGGC GATCGACCGG CTCACCGCCT TCTGCCGCCG CTCGCTGCCG
GGCTGTGAGG CGGCCTACAT CGGCATCGTC GCGCCGATGG TGGGCGTGCG CGAGACGCGG
CGAATCGTGG GCGAGTACAC CCTGACGCTG GAGGACATTC TGGACTGTCG CCGCTTCGAG
GACGCCATCT GCCGCAACCA CTATCCGGTG GACATCCATT CGGTGAAGGG CGGGGCACGG
CTGCTCCACG AGCGGGACGG CAGCGCACCC TATTTCGCCC CCGACGCCTA TCACGAGATC
CCTTACCGAG CACTGGTGCC CCTTGGCCTG CGCAATGTGC TCGTGCCGGG GCGGGCAGCC
TCCAGCACCT TCGAGGCGCA GTCGGCCATC CGGGTGCAGC AGAACTGCCA CACGATGGGC
GAAGCGGCGG GCATCGCGGC GGCGTGGGCC GCGCGGGACT GCGGCGGGGA GGTACGGGCG
GTGGACATCG CGGCCTTGCG GGCAGAGATG CGGCGGCTGG GGGGGAACGT ATGA
 
Protein sequence
MTLPYRTEPR TWDVMVAGGG TAGAIAGVAA ARAGARVLVV EALGSLGGTG TNAWVTPLMR 
NVSGGQNLNR GLTDELKARL RARGDGASDK GGNDNWFNPE GLKVVLEKML LEAGGEVLYH
TQVVLPVLNG ERVEALVLHN KGGLQAFRAA VFIDATGDAD VVARAGAPFQ AGDEDGLHQA
MSLRFTLAGV DTGRLCAFLN EHGQPQTSPD FLHFWMVWGR GSSLEPLFRE AVTAGVLEER
DGDYFQGFSV PGRPGEISFN CPRIRADLND GTDPWQLSAA QTDGRAAIDR LTAFCRRSLP
GCEAAYIGIV APMVGVRETR RIVGEYTLTL EDILDCRRFE DAICRNHYPV DIHSVKGGAR
LLHERDGSAP YFAPDAYHEI PYRALVPLGL RNVLVPGRAA SSTFEAQSAI RVQQNCHTMG
EAAGIAAAWA ARDCGGEVRA VDIAALRAEM RRLGGNV