| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_1033 |
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| Symbol | |
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| ID | 4057993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 1104077 |
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| End bp | 1105132 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641230050 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_604501 |
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| Protein GI | 94985137 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.895977 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00144137 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCCTAAAG TCGTCACCCT ACCCGGCGAT GGGATCGGCC CCGAAGTCAC CGCTGCCGCC
GCCGAAGTGC TGCGCGAGGT CGCGCCCGAC GTCCACATTG AGGAACACGC CATCGGTGGC
GCGGCCTACG AACAGTTCGG GGATCCCTTC CCGCAGCGGA CCCGTGACGC CCTAGGGGAC
GCGGACGCGG TGCTGCTGGG GACCGTGGGG GGCGCGCAGA ACAGCCCCTG GAACAGCCTT
CCGCGTCCCT TGCGCCCGGA AAGCGGCCTG CTGGCGCTGC GCCGGGCGCT GGGCTGTTAC
GCCAACCTGC GGCCCGTGCG GGTGCTGCCG GGTCTGGAAC ACCTCTCGCC GCTCAAGCCC
GAACTGGCGC GCGGCGTGGA CATCCTGATT GTGCGTGAGC TGCTGGGCGG CATCTACTTC
GACGGCGACC GCAAGATCGA GGGGGACACG GCTTACAACA CCATGCGCTA CACCACGCCC
GAGGTCGAGC GCGTGGCAAG GGTGGCCTTT TGGGCCGCCG AGCAGCGCCG GGGTCGCGTG
ACGAGCGTGG ACAAGGCCAA CGTGCTGGAG GTGTCTGAGC TGTGGCGCCG CGACGTACAG
GCCCTGCGCG ACCGCGAGTA CCGCAACGTC CACCTCAACC ATGAGTACGT TGATTCGGTC
GCCATGCTGA TTGTTGCCAA TCCCAGCCGC TACGACGTGA TTCTCACCGA GAACCTCTTC
GGGGACATTC TCTCCGACCT GGCCGCTGTG ATTCCTGGTT CGCTGGGCTT GATGCCGAGT
GCCTCGCTGG GCGACGGCCC CGGTCTCTTT GAGCCGATCC ACGGCAGCGC CCCCGACATT
GCCGGGCAGG GCATCGCCAA CCCCGCCGCC GCGATCATGA GCGTAGCGAT GCTGCTGCGC
CACGGCCTCG AGCGTCCCCA GGTGGCCAAC CAGGTCGAGC GGGCGGTGGC CTTGGCCCTG
CGCGAGCATC CCACCCGTGA CCTGGGTGGG CAGGCCGATA CGCGGACCTT CACACACGCT
GTGCTGGACG CAATGGGGAG CCCGAGTGTG GGATAA
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| Protein sequence | MPKVVTLPGD GIGPEVTAAA AEVLREVAPD VHIEEHAIGG AAYEQFGDPF PQRTRDALGD
ADAVLLGTVG GAQNSPWNSL PRPLRPESGL LALRRALGCY ANLRPVRVLP GLEHLSPLKP
ELARGVDILI VRELLGGIYF DGDRKIEGDT AYNTMRYTTP EVERVARVAF WAAEQRRGRV
TSVDKANVLE VSELWRRDVQ ALRDREYRNV HLNHEYVDSV AMLIVANPSR YDVILTENLF
GDILSDLAAV IPGSLGLMPS ASLGDGPGLF EPIHGSAPDI AGQGIANPAA AIMSVAMLLR
HGLERPQVAN QVERAVALAL REHPTRDLGG QADTRTFTHA VLDAMGSPSV G
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