Gene Dgeo_1032 details

Gene Information

• Locus tag: Dgeo_1032
• Symbol: leuD
• ID: 4057992
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Deinococcus geothermalis DSM 11300
• Kingdom: Bacteria
• Replicon accession: NC_008025
• Strand: +
• Start bp: 1103560
• End bp: 1104084
• Gene Length: 525 bp
• Protein Length: 174 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 641230049
• Product: 3-isopropylmalate dehydratase small subunit
• Protein accession: YP_604500
• Protein GI: 94985136
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0066] 3-isopropylmalate dehydratase small subunit
• TIGRFAM ID: [TIGR02087] 3-isopropylmalate dehydratase, small subunit

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 0.118082
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 6
• Fosmid unclonability p-value: 0.00124766
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGCCCACCG TTCACGTTTT TGCCCGGGAC CACATCAACA CCGACGAGAT CATCCCCGCC 
CGCCACCTGA CGACCGACGT CGAAGCTGAG CTGGCAAAGT ACGCGATGGA GGACTACGAC 
AAAAACTTTG TCAAGCGTGT GAAGCCGGGC GACATCATCG TGGCGGGGGC GGATTTCGGC 
TGCGGATCCA GCCGCGAACA TGCTGTGTGG GCGCTGCGCG GTGCGGGTGT GGCGGCCGTG 
ATCGCGCCCA ACTTCGCCCG CATCTTCTAC CGCAACGCGA TCAACAACGG CTTCCTGGCG 
CTGGAGTGCG AGAATGTGGT CGAGACCTTT ATGGACGGCG ACCCAGCGGA GCTGGACCTC 
ACGGGCGGCA CCATCACGAA TCTGCGCACC GGCCAGACGC TGCATTTCGT GCCTGTGCCC 
CAATTCGCGC TGGACGTGCA GAAGGCTGGA GGCTGGCTGG AATACATGCG CGAACAGGAC 
CGGCAGCAGA GCGGACAGTC CCAGCAGGAG GAACAACATG CCTAA 

 

Protein sequence

MPTVHVFARD HINTDEIIPA RHLTTDVEAE LAKYAMEDYD KNFVKRVKPG DIIVAGADFG 
CGSSREHAVW ALRGAGVAAV IAPNFARIFY RNAINNGFLA LECENVVETF MDGDPAELDL 
TGGTITNLRT GQTLHFVPVP QFALDVQKAG GWLEYMREQD RQQSGQSQQE EQHA