Gene Dgeo_0988 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0988 
Symbol 
ID4058124 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp1059124 
End bp1060575 
Gene Length1452 bp 
Protein Length483 aa 
Translation table11 
GC content65% 
IMG OID641230006 
Producthypothetical protein 
Protein accessionYP_604457 
Protein GI94985093 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1509] Lysine 2,3-aminomutase 
TIGRFAM ID[TIGR00238] KamA family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.709939 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.113697 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAGTC CCACGAAACT GCACCCGCAA GCGACCGTGC GGTCGCAACA GATGCTGCCC 
CGCAACCACC GTGCTCCCAA ATGGGCGGAC GTGCCCGATG AACTGTGGTA CGACTGGAAG
TGGCAGCTCA AGAACCGCAT CAACTCCGTC GAGGAACTCG AGGAGGTGAT CCGCCTCACG
CCCTCCGAGC GGGCGGGCGC GAGCGCCGAA GGCATCTTCC GCCTGGACAT CACGCCCTAC
TTCGCTTCTC TCATGGACCC CGAAGACCCC ACCTGTCCGG TGCGCCGCCA GGTGATTCCC
ACCCACCACG AGCTGGAACC CTTCACCGCG ATGATGGAGG ACTCCCTCGC GGAGGACAAG
CACAGCCCGG TACCTGGCCT GGTGCACCGC TACCCCGACC GGGTGCTGAT GCTGGTCACA
ACCCAGTGCG CGAGCTACTG CCGTTACTGC ACCCGCTCGC GCATCGTGGG CGACCCAACC
GAGACCTTTA AGCCCGACGA GTATCGGCTG CAACTCGAAT ACCTGCGCAA CACGCCGCAG
GTGCGCGACG TGCTGCTCTC CGGCGGTGAC CCCCTCACCC TCGCGCCCAA AGTCCTCGCG
GGCCTGCTCT CGGAGCTGCG CAAGATCGAG CACATCGAGA TTATCCGCAT CGGGACGCGC
GTGCCGGTCT TTCTGCCCAT GCGCATCACG CAGGAACTGT GCGACGTGCT GGCCGAACAC
CACCCGCTGT GGATGAATAT CCACGTGAAT CACCCCAAGG AGATCACGCC GGAAGTCGCC
GAGGCCTGCG ACCGCCTCAC CCGAGCGGGT GTGCCCCTGG GCAACCAGAG CGTGCTGCTG
CGTGGCGTGA ACGATCACCC GGTCATCATG CAAAAGCTGG TGCGCGAACT CGTCAAGATT
CGGGTGCGGC CCTACTACAT CTACCAGTGT GACCTTGTGC ATGGCGCCGG GCACCTGCGC
ACCACCGTCG CCAAGGGCTT GGAGATCATG GAGAGCCTGC GCGGTCACAC CAGCGGCTAC
TCCGTCCCGA CCTACGTCGT CGACGCGCCC GGCGGCGGCG GCAAGATTCC GGTTGCCCCC
AACTATGTCC TCTCGCACTC CCCCGAAAAG CTGATTCTCC GCAACTTCGA GGGCTACATC
GCCGCCTACT CGGAGCCGAC CGACTACACC GGCCCCGACA TGGCTGTTCC CGCAGAGTGG
CAGCGCAAGG AACCCGGCCA GAGCGGGATC TACGGCCTGA TGGAAGGTGA GCGCATCTCC
ATCGAGCCGA AGGAATTCAG CGAAAGCCGC CACCGCCCCG GCGCGATGCG GCACCGCCTC
AACAGCCGCG AGGACAAGTG GGCGGCGTAC GGCGTGGGGG AGAACAGCGG ACCCCTCACC
CCTGACACGC GGGTGACAGA CACTGCGCCA GACGGCCAGG TGAACGCCCC ACAGCCAGTG
AGTGGAGACT GA
 
Protein sequence
MPSPTKLHPQ ATVRSQQMLP RNHRAPKWAD VPDELWYDWK WQLKNRINSV EELEEVIRLT 
PSERAGASAE GIFRLDITPY FASLMDPEDP TCPVRRQVIP THHELEPFTA MMEDSLAEDK
HSPVPGLVHR YPDRVLMLVT TQCASYCRYC TRSRIVGDPT ETFKPDEYRL QLEYLRNTPQ
VRDVLLSGGD PLTLAPKVLA GLLSELRKIE HIEIIRIGTR VPVFLPMRIT QELCDVLAEH
HPLWMNIHVN HPKEITPEVA EACDRLTRAG VPLGNQSVLL RGVNDHPVIM QKLVRELVKI
RVRPYYIYQC DLVHGAGHLR TTVAKGLEIM ESLRGHTSGY SVPTYVVDAP GGGGKIPVAP
NYVLSHSPEK LILRNFEGYI AAYSEPTDYT GPDMAVPAEW QRKEPGQSGI YGLMEGERIS
IEPKEFSESR HRPGAMRHRL NSREDKWAAY GVGENSGPLT PDTRVTDTAP DGQVNAPQPV
SGD