Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0952 |
Symbol | |
ID | 4058650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 1018784 |
End bp | 1019560 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641229971 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_604422 |
Protein GI | 94985058 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | [TIGR01963] 3-hydroxybutyrate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0412678 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.59225 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTTCCC AGGAACATCA GGAAGCCCGC GTCGCCCTCG TCACGGGCGG GAGCAGCGGC ATCGGCCTCG CCATCGCGCA GCGGCTGCAG GCCGACGGGT TGAAGGTGGC CGTGCTGGAC CTCGACCGCC CGCAGGCACG CGAGGGGGCA GAGCAGAATG GCTTCACCTT TATCGGCGCC GACCTTTCCC GCCGCGAGGA CTGCCGCCGC GCAGTGGAGG AAACGGTGGC CGCGCTGGGA GGCTTGGACG TGCTGGTCAA CAACGCGGGC TTTCAGCACA TCGACCCCAT CGCGGACTTT CCCGAAGACA CCTGGGACAG CATGCTGCGC GTGATGCTGA CCGCGCCGTT TTTGCTCACC AAGTACGCCT GGGGGTACCT CACGCGCTCG GGGCAGGGCC GCGTTGTGAA TATCGCCTCC ATCCACGGGC AGGTTGCCAG CCCCTTCAAG AGTGCCTATA TCAGCGCCAA GCACGGGCTG ATCGGCCTGA CGCGCACGGC GGCGCTGGAG GCGGGCGAGC AGGGCTTCAC CGTGAACGCG ATCTGCCCGG GCTACGTCCG CACGCCCCTG GTGGAGGGCC AGATCGCGGA CCAGGCCCGC ACCCGCGGCC TCAGCGAGCA GGAGGTCGAG CAGCGGGTGA TGCTCGAACC CGCCGCCATC AAGCGGCTGC TGGCGCCGGA GGACGTGGCG GCCCTCGCGA GCTACGTGGT CAGCCCGGCC GCCTGGGGCA TGACGGGCGC GGTGCTGGAC CTCGACCTGG GGTGGACGGC GCGCTAA
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Protein sequence | MPSQEHQEAR VALVTGGSSG IGLAIAQRLQ ADGLKVAVLD LDRPQAREGA EQNGFTFIGA DLSRREDCRR AVEETVAALG GLDVLVNNAG FQHIDPIADF PEDTWDSMLR VMLTAPFLLT KYAWGYLTRS GQGRVVNIAS IHGQVASPFK SAYISAKHGL IGLTRTAALE AGEQGFTVNA ICPGYVRTPL VEGQIADQAR TRGLSEQEVE QRVMLEPAAI KRLLAPEDVA ALASYVVSPA AWGMTGAVLD LDLGWTAR
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