Gene Dgeo_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0912 
Symbol 
ID4059195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp973063 
End bp974274 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content64% 
IMG OID641229932 
ProductNADH dehydrogenase I, D subunit 
Protein accessionYP_604383 
Protein GI94985019 
COG category[C] Energy production and conversion 
COG ID[COG0649] NADH:ubiquinone oxidoreductase 49 kD subunit 7 
TIGRFAM ID[TIGR01962] NADH dehydrogenase I, D subunit 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGG AACCCCTCAC CCCCCCCACC AGCGGCGCCC TGCTCCACAC CGAGATCATG 
AGCCTGAACG TGGGGCCGCA GCATCCTTCC ACACACGGTG TTCTGCGGCT GGTGGTGGAT
ATGGACGGCG AGTACGTCAC GCGGGTCACG CCGCATATGG GGTACCTCCA CACCGGCTTT
GAGAAGACCT TCGAGCACCG CACCTACCAC CAGGGCGTCA CCTACGCGCC GCGCACCGAT
TACCTGCACT GCTTTGGACA CGAACTCGCC TATGTCCTGA GTGTGGAAAA GCTGTTGGGG
GCCGAGGTGC CGGAACGCGC GACCACCGTG CGGGTGATGC TGCATGAGCT GGGCCGCATC
CACTCGCACC TCGTCTTTGT GGGCACAGGC CTGCTCGACC TCGGCGCGCT GACGCCCTTC
TTCTACGCCT TTCGCGAGAA GGAGGCGGTG CAGGACCTGT TTGAGGCCGT GTGTGGCTAC
CGGATGAACC AGGGCTACTT TCGGGTGGGT GGCCTCGCGC GCGACATCCC GGAAGACTGG
CCTGCCCGCG TCGCTGCCTT CCTCGACACC TTCGAGCGCG GAGTGGACGA GTACGAGACG
CTATTTGCCA AGAATCCGAT CTTTCTCGAC CGTGCGAAGG GGGTCGGCGT GATTCCGCGT
GACGTGGCGA TCGACCTGGG CCTGACTGGG CCGAACCTGC GGGCCTCGGG TGTGCCACTT
GACCACCGCA AGGCCAACCC CTACTGCGGC TACGAGACCT ACGACTTCGA GGTGCCGGTG
AGTCAGGCCG GAGACAGCCT GGCGCGCTTT CAGCTGCGGC TGCTGGAGTT GCGCGAGAGC
GCAAAGATTA TCCGGCAGGC CCTGAAACGC CTCACGCCTG GCCCCATCAA GGACCCCAAC
CGCAAGATTT CGCTGCCGCC CCGCTCCGAA CTTGAAACCA GCATGGAGGC GGTCATCCAC
CACTTCAAGC TGGTGACGGA AGGCTTTCAT CCCCCTAAGG GCGAAGTGTA CGTGCCGACC
GAATCTGCCC GCGGCGAGGT TGGCTATTAC ATCGTCTCGG ACGGCGGCTC GATGCCCTAC
CGGGTGAAGA TCCGCGCGCC CAGCTTTGTG AACCTGCAAG CCCTCGAATA CGCCTGCGTG
GGAGGACAGT TCGCGGACCT GATCACGATT CTGGCGTCGA TCGATCCGGT GCTGGGAGAC
GTGGACCGGT GA
 
Protein sequence
MTTEPLTPPT SGALLHTEIM SLNVGPQHPS THGVLRLVVD MDGEYVTRVT PHMGYLHTGF 
EKTFEHRTYH QGVTYAPRTD YLHCFGHELA YVLSVEKLLG AEVPERATTV RVMLHELGRI
HSHLVFVGTG LLDLGALTPF FYAFREKEAV QDLFEAVCGY RMNQGYFRVG GLARDIPEDW
PARVAAFLDT FERGVDEYET LFAKNPIFLD RAKGVGVIPR DVAIDLGLTG PNLRASGVPL
DHRKANPYCG YETYDFEVPV SQAGDSLARF QLRLLELRES AKIIRQALKR LTPGPIKDPN
RKISLPPRSE LETSMEAVIH HFKLVTEGFH PPKGEVYVPT ESARGEVGYY IVSDGGSMPY
RVKIRAPSFV NLQALEYACV GGQFADLITI LASIDPVLGD VDR