| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0887 |
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| Symbol | sdhA |
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| ID | 4057811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 947471 |
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| End bp | 949222 |
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| Gene Length | 1752 bp |
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| Protein Length | 583 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 641229907 |
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| Product | succinate dehydrogenase flavoprotein subunit |
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| Protein accession | YP_604358 |
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| Protein GI | 94984994 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
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| TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup
[TIGR01816] succinate dehydrogenase, flavoprotein subunit, E. coli/mitochondrial subgroup |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACCATC GTTACGACGT ACTGGTGGTT GGCGCGGGCG GCGCGGGACT GATGGCCGCC
CTGTACGCCG CCAAGGGCAA CGTGTCGGTT GCCTGCATCA GCAAGCTCTA TCCCACCCGG
TCCCACACCG GCGCTGCCCA GGGTGGCATC GGCGCGGCGC TTGGCAACGT GTCCGAGGAC
CACTGGGAAT GGCACATGTT CGACACCGTC AAGGGCGGCG ACTACCTCAC CGACCAGGAC
GCAGCGGAGA TCTTTGCCAA GGACATCATC GAGGCGGTGT ACGAACTCGA ACACATGGGG
CTGCCCTTTA GCCGCCTCCC CAACGGCAAG ATTGCGCAGC GCAAGTTCGG CGGCCACACC
CGTGACTTCG GGAAGGCGGC GGTCGAGCGC TCCTGCTACG CACAAGACCG CACCGGCCAC
ATGATTCTGC AAACGCTCTA CCAGCAGAAC GTCAAGGCCG GAACCACCTT CTACAACGAG
TTTCACGTCA CCGACCTCAT CCTCGAAAAC GGGCGCTGCT GCGGCGTGGT TGCCTACCAC
CTGGCCACGG GCGAGATTCA CACCTTCCAC GCCAAGGCCG TGATCCTGGC GGCGGGTGGC
TACGGGCGCG TCTACAAGAT CACTTCCAAC GCCCTCACGC TGACCGGCGA CCTGATGAGC
ATCTACTACC GCAAAGGCCT GCCGCTGGAG GACATGGAGT TCTACCAGTT CCACCCCACC
GGCCTCGCCA AGCTAGGGAT TCTGGTGACG GAAGGCATTC GCGGTGAGGG CGGTATCCTG
CGCAACTCCA GCGGCGAGCG CTTCATGGAA CGCTATGCGC CCACCATCAA AGACCTCGCG
CCGCGTGACA TCGTCTCGCG TTCGATCATC ACCGAGATTC GCGAGGGCCG CGGTGTGGGC
CGCGATAAGG ACGCGGTCTA TATCGACCTG ACGCACCTGC CGCGCGAAGT CATCGAGGTC
AAGCTGGCCG AGATCACCGA CCTGGCGCGC ACCTACCTGG GGCAGGACCC AGTCAAGGAC
CTGGTCGCCG TGCAGCCGAC GGCGCACTAC GCGATGGGCG GCATTCCCAC CGACGTGAAC
GGCCTGTGCC TGGCAGACGG ACAGGGCACC AAGGTCGAGG GGCTGTACGC GGCAGGTGAG
CAGGCCTGTG TCTCGCTGCA CGGCGCCAAC CGCCTGGGGA CCAACTCGCT GGGCGACCTG
ATCGTGTTCG GTCGGCGCGC CGGGATTGCC GCGGCCCTGT ACGCGCGCCA GGCCGAATAC
GCCGAGATGC CCGAGCACCC CGAGCGCGAC ACTGTGGAGA TGATTGCGCG CTTGCGGAAT
GCGAGCGGCA AGGACAGCCC TGCTGTGATC CGCAAGGAGC TGCAAGAGTC GATGATGAAC
AACGTCGGCA TCTTCCGCAA CGGCCCGGAT ATGGAAAAGC AGGTCGAAAT CATCAAGGAG
CTCAAGGAGC GCTACCAGAA TGTCGCGGTG ACCGACCCCG GTGCTCGCTA CAACAGCGAC
CTCATCGAGG CGATGGAACT CGGCTTCCTG CTCGACTGTG CCGAAGCTGC CACCGCCAGT
GCGCTCAATC GCAAGGAGTC GCGCGGCGCC CACGACCGCG AGGATTATCC TGAGCGCGAT
GACCAGAACT GGCTGAAGCA CACGATGGCG TACAAGGATC TGAGCCGCCC CGGCAATGTG
GTGATCGGCT ACAAGGAAGT CGCCCTCAAG GGCTACACCC GGGCCTTCGA GCCGAAGCCG
CGCGTGTACT GA
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| Protein sequence | MHHRYDVLVV GAGGAGLMAA LYAAKGNVSV ACISKLYPTR SHTGAAQGGI GAALGNVSED
HWEWHMFDTV KGGDYLTDQD AAEIFAKDII EAVYELEHMG LPFSRLPNGK IAQRKFGGHT
RDFGKAAVER SCYAQDRTGH MILQTLYQQN VKAGTTFYNE FHVTDLILEN GRCCGVVAYH
LATGEIHTFH AKAVILAAGG YGRVYKITSN ALTLTGDLMS IYYRKGLPLE DMEFYQFHPT
GLAKLGILVT EGIRGEGGIL RNSSGERFME RYAPTIKDLA PRDIVSRSII TEIREGRGVG
RDKDAVYIDL THLPREVIEV KLAEITDLAR TYLGQDPVKD LVAVQPTAHY AMGGIPTDVN
GLCLADGQGT KVEGLYAAGE QACVSLHGAN RLGTNSLGDL IVFGRRAGIA AALYARQAEY
AEMPEHPERD TVEMIARLRN ASGKDSPAVI RKELQESMMN NVGIFRNGPD MEKQVEIIKE
LKERYQNVAV TDPGARYNSD LIEAMELGFL LDCAEAATAS ALNRKESRGA HDREDYPERD
DQNWLKHTMA YKDLSRPGNV VIGYKEVALK GYTRAFEPKP RVY
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