Gene Dgeo_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0802 
Symbol 
ID4058096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp858615 
End bp859475 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content68% 
IMG OID641229822 
Productinner-membrane translocator 
Protein accessionYP_604273 
Protein GI94984909 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0559] Branched-chain amino acid ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACTCT TTTGGCAAAC CCTGCTCAAT GGCCTGCTGC AAAGCGGCCT GTACGCGCTC 
GTCGCAGCGG GGCTGGCGCT GGCGGTGGGC GTGGTCGGCA TCGTCAACTT CGCGCACGGC
GAGTTCCTGA TGATCGGCGC GTTTCTGGCC TGGGGCGCGA GCACCTCCTT GGGTGTGGAC
CCGCTGCTCT CGCTGCCGCT GGTGGCGGTC GCCGTCTTCG CGGTGGGCGC GCTGACGTAC
CGGGTGAGCA TCCGGCACGT GCTGCTGGCG CCCGAGCTGA ATCAGATGCT CCTCACCTTT
GGCCTGGGCA TCCTGCTACA GAACCTCGCG CTGATGTGGC TGGGCGGCAA TACGCGCACG
GTCACCACGC CGTATCAGGG CAGCTCCATC CGACTCGGCG ACCTCAGTGT GGGTGGGCCG
AAAGCCATCG CGTTCGGGCT GGCGGTGGTG ATTCTGGCGG CGCTGTACGC GGTGCTGTAC
CGCACCAACC TGGGCCGCCA GATGCGGGCG GTTGCCCAGA ACCGGCGCGG CTCGCAACTG
ATTGGGATCC ATGTAGACCG GGTGTACCTG ATCGCCTTCG GGGTGAGCTG CGCCCTGGCA
GCCGTCGCGG GGGTGCTGGT CGCCACGCTG CTGTTCGCGT CGCCCACCGT CGGGCTGGTC
TTCGCGCTAA AAGCCTTCGC GATCATCGTG ATGGCGGGAT TGGGCAACCT GACGGGCGTA
CTGTGGGCCT CGGTGGTGCT GGGCGTCTCC GAGGCGCTGG TGCAGACTTA CGTGCCGGGG
GGCGGCGGCT GGAGCGACGC CGTCTTCTTC CTGCTGATCT TCGCCACGCT GGTGTTCCGG
TCGTTCCGGG GGGCCAGGTG A
 
Protein sequence
MELFWQTLLN GLLQSGLYAL VAAGLALAVG VVGIVNFAHG EFLMIGAFLA WGASTSLGVD 
PLLSLPLVAV AVFAVGALTY RVSIRHVLLA PELNQMLLTF GLGILLQNLA LMWLGGNTRT
VTTPYQGSSI RLGDLSVGGP KAIAFGLAVV ILAALYAVLY RTNLGRQMRA VAQNRRGSQL
IGIHVDRVYL IAFGVSCALA AVAGVLVATL LFASPTVGLV FALKAFAIIV MAGLGNLTGV
LWASVVLGVS EALVQTYVPG GGGWSDAVFF LLIFATLVFR SFRGAR