| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0710 |
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| Symbol | |
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| ID | 4059071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | + |
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| Start bp | 767862 |
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| End bp | 769490 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641229729 |
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| Product | D-3-phosphoglycerate dehydrogenase |
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| Protein accession | YP_604181 |
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| Protein GI | 94984817 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
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| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.196237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGGTCC CTGTTCTCAG CAGCCCGGAT CAAGCCCGCA CCGCGCCTCT GCGTGTGCTG
ATCTGTGACG AGATGAACCC CGGTGACCTG CACCACGAGG GGTTCGAGAT CGACTATGAG
GGCAACCTGC CGCGCGAGGA GACGCTGCGC CGCCTCCCTG GGTACGACGC CCTGATCACC
CGCAGCCGCA CCAAGGTGGA CCGCGAGCTG TTGGAGGCAG CGGGCGACCG CCTGAAGGTG
ATAGGGCGCG GCGGCGTCGG CGTGGACAAC ATTGACCTGG AGGCGTGCAG TCGCCGGGGC
ATCCTGGTGC TGAACGCACC CGAGAGCAAC AATGTCTCGG CGGCCGAGCT GGCGATCATG
CACCTGTTGG CTGCCGCCCG GGGCCTGACC CGTTCGGATC GCAAGACCCG TGCGGGCGAG
TGGGACCGCA AGTTCTTGGG TGTAGAACTC AAGGACAAGA CGCTCGGGAT TGTCGGGCTG
GGCCGCATCG GTTCCATCGT GGCGGACCGG GCGCAGGGCC TGCGGCTGAA GGTGGTGGCC
TATGACCCCT ACGTGCCCGA GAACAAGTTC GAACGCCTGG GCGTGGAGCG GGCGGCGACC
CTGGACGAAC TGCTGACGCG GGTGGATTTC CTGACCGTCC ACACACCGCT GACCGAGGAG
ACAAACGGGA TGATTGGCGC GCGTGAACTC GCGCTGCTGA AGCGCGGCGC CATCGTGGTG
AACGCGGCAC GCGGCGGCAT CGTGCAGGAG GCGGCGCTGG TGGAGGCGCT GCAATCCGGT
CACCTCTTTG CCGCAGGTGT GGACGTGTTC GTGGAGGAAC CTCCGGCCCC CGACCATCCT
TTCCTCTCTG CCCCCAATCT GGGGATCACT GCCCACCTTG GCGCGAACAC CTTCGAGGCG
CAGGAGCGGG TCGGCGCGGA GATTGTGGGC CGAGTGCTGG CCGCCCTGCA CGGCGACGTC
AGCAAGGGCG CCGTGAATGC CCCGGCCCTG GATGCCAAGA CGCTCGAGCT GCTCGGCGGC
TACCTCGATC TGGGCGAGAA GCTGGGCCGC ATCTTGGCGC AACTGCTGCC TGGTGCCCAC
GACCTGGAGG TGACCTTCCG GGGCGAATTC CCGGCGGATC CCGCTCCGGT GGTCACCGCC
GTCTTGGTCG GCTACCTCAG CGGCAGCACC GACGAGCGGC CCAACATGAT CAACGCCCGC
GCGCTGGCCA AAGAGCGCGG CCTCAATCTC GCGGTGCGCG AAGAGGGGGA CAGCCCCGAC
TACCAGACCG AGGTGATCGT GAAGGTCGTG AGCGGCCAGG CAGGTGAGAA GCAGCGCACC
CGCACGGTAG GCGGCACCGT CTTTGGTCGC AGCCCACGCC TCACCCGCCT GCGTGACTAC
CGCGTGGAAC TGGCCCCGGA AGGCTTCATC CTGATCGCCT CCAACCAGGA CCGGCCCGGC
GCGGTCGCCA AGCTCTCCAA CCTGCTGGGT ACCTGGGGCA TCAACATTGC GGGAATGGCG
CTGGGGCGCG CGCAGAAGGG CGGTCAGGCG CTCTTCACCC TGACGTTGGA CGACGGCCTG
ACGCCCGAGC AGCTCCAGGC GATCCGTGAT CTGGACGTGA TTGATTCGGC GTTCCTGGTG
CGGGTCTGA
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| Protein sequence | MTVPVLSSPD QARTAPLRVL ICDEMNPGDL HHEGFEIDYE GNLPREETLR RLPGYDALIT
RSRTKVDREL LEAAGDRLKV IGRGGVGVDN IDLEACSRRG ILVLNAPESN NVSAAELAIM
HLLAAARGLT RSDRKTRAGE WDRKFLGVEL KDKTLGIVGL GRIGSIVADR AQGLRLKVVA
YDPYVPENKF ERLGVERAAT LDELLTRVDF LTVHTPLTEE TNGMIGAREL ALLKRGAIVV
NAARGGIVQE AALVEALQSG HLFAAGVDVF VEEPPAPDHP FLSAPNLGIT AHLGANTFEA
QERVGAEIVG RVLAALHGDV SKGAVNAPAL DAKTLELLGG YLDLGEKLGR ILAQLLPGAH
DLEVTFRGEF PADPAPVVTA VLVGYLSGST DERPNMINAR ALAKERGLNL AVREEGDSPD
YQTEVIVKVV SGQAGEKQRT RTVGGTVFGR SPRLTRLRDY RVELAPEGFI LIASNQDRPG
AVAKLSNLLG TWGINIAGMA LGRAQKGGQA LFTLTLDDGL TPEQLQAIRD LDVIDSAFLV
RV
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