Gene Dgeo_0680 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0680 
Symbol 
ID4058262 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp738195 
End bp739439 
Gene Length1245 bp 
Protein Length414 aa 
Translation table11 
GC content63% 
IMG OID641229699 
Producttransposase, IS605 OrfB 
Protein accessionYP_604151 
Protein GI94984787 
COG category[L] Replication, recombination and repair 
COG ID[COG0675] Transposase and inactivated derivatives 
TIGRFAM ID[TIGR01766] transposase, IS605 OrfB family, central region 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.143761 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACAGGG CGGAAACGGT CATTCTCAAA CTGGCCGCCC CGTCTGCGAA CAAACGAGCG 
TGGTTGTCTC AGACCGCTCA GGCGTTCCGG GACGGGGTAG GGATGGTTTT GGGTGTGGCT
GAATCCGAGA AGACGGGCAG TCGGGCCAAA CTGCACAACG CCTGCTACGC CGCCATCCGG
GAGGAAACTG GCCTGCCCAG CGACTACGCC CGCATGGCGG TCAACGCAGG GGTTGCGCTG
GCCCGTTCCT ACTGGGCCTT GCGAAAGGGA AAGCGCCGCC CCTCCTTTCC GAAGGTGGGG
AAGTCTCAGG GCATTGGGCT GGGCGTCAAT GCCTACGCTG TCCTGAAACG CGGTGAGCGG
TTCTTTCTGC GGGCCTCTAC TGGGAAGCGT GGCTCCTACA AGTGGTTTCC ACTTTCCGTA
CCTGTGCATC TGGCCTCCAA ACTTGAGTTC GTTCATGGCG ACGCCAAGCT GTTCCAGCGT
GGAAGAGATT GGTTCGTCAT GCTTCCGCTT CGCCTCCCCC ACACGCCAGC CGTCCGTGAC
GGTGAACCTA CGGTTCTGGG CGTGGATTTG GGCGTGGTGA AGCTGATGAC GGTGCTGACA
CCGGACGGCG TGAAGATTTG GAACGGTCTG CCTGTGCGCC ATCGCCGGGA GAGATTCGCT
GCTGTTCGTC GCCGCCTCCA GAGGCATCGC CGCACCGACC GCGTGAAGGC GCAGGGAGGG
CGTGAACGCC GCTGGATGTC GGGGCTGAAC CACAAACTCA GTCGTGAACT CGTTGACCTT
GCCCGCTTCT ACAAGGACGC GGTCATCGCC TTTGAGCAGC TGGACGGGAT TCGTGACCGG
GTACGGGGCA GCAAGAAGTT CAACCGGATG ATGAGCAGCT GGACGTTCCG TGACCTCGTG
GACAAGGTGC GGTACAAGGC GGAAGCGGCT GGGGTGGGCG TGGTCTTCGT TGACCCGCGC
AAGACTTCCC AGACCTGCCA CCGCTGCGGA CATGCCACGC GGAGTAACCG GACGTCTCAG
GCTGAGTTTC GATGTGTGAA CTGCGGATTC AGGACGAATG CGGACTGGAA CGCGGCCACC
AACATCGCTG CTGCCGGGCT GCGTGCCTTG CAGCAGGGGC CGACTGACAC GGCCCGCTCT
GCTCACGCAG AGCAGGCGTC GTCCTCGTTG ACGGCGCTCG ATGGAGTAAA GGTGCGCGAG
GCGCAAGTTT CGCACACAGA CTCCAACCTC GTAAGCCCCG CGTAG
 
Protein sequence
MHRAETVILK LAAPSANKRA WLSQTAQAFR DGVGMVLGVA ESEKTGSRAK LHNACYAAIR 
EETGLPSDYA RMAVNAGVAL ARSYWALRKG KRRPSFPKVG KSQGIGLGVN AYAVLKRGER
FFLRASTGKR GSYKWFPLSV PVHLASKLEF VHGDAKLFQR GRDWFVMLPL RLPHTPAVRD
GEPTVLGVDL GVVKLMTVLT PDGVKIWNGL PVRHRRERFA AVRRRLQRHR RTDRVKAQGG
RERRWMSGLN HKLSRELVDL ARFYKDAVIA FEQLDGIRDR VRGSKKFNRM MSSWTFRDLV
DKVRYKAEAA GVGVVFVDPR KTSQTCHRCG HATRSNRTSQ AEFRCVNCGF RTNADWNAAT
NIAAAGLRAL QQGPTDTARS AHAEQASSSL TALDGVKVRE AQVSHTDSNL VSPA