Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0680 |
Symbol | |
ID | 4058262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 738195 |
End bp | 739439 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641229699 |
Product | transposase, IS605 OrfB |
Protein accession | YP_604151 |
Protein GI | 94984787 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0675] Transposase and inactivated derivatives |
TIGRFAM ID | [TIGR01766] transposase, IS605 OrfB family, central region |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.143761 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACAGGG CGGAAACGGT CATTCTCAAA CTGGCCGCCC CGTCTGCGAA CAAACGAGCG TGGTTGTCTC AGACCGCTCA GGCGTTCCGG GACGGGGTAG GGATGGTTTT GGGTGTGGCT GAATCCGAGA AGACGGGCAG TCGGGCCAAA CTGCACAACG CCTGCTACGC CGCCATCCGG GAGGAAACTG GCCTGCCCAG CGACTACGCC CGCATGGCGG TCAACGCAGG GGTTGCGCTG GCCCGTTCCT ACTGGGCCTT GCGAAAGGGA AAGCGCCGCC CCTCCTTTCC GAAGGTGGGG AAGTCTCAGG GCATTGGGCT GGGCGTCAAT GCCTACGCTG TCCTGAAACG CGGTGAGCGG TTCTTTCTGC GGGCCTCTAC TGGGAAGCGT GGCTCCTACA AGTGGTTTCC ACTTTCCGTA CCTGTGCATC TGGCCTCCAA ACTTGAGTTC GTTCATGGCG ACGCCAAGCT GTTCCAGCGT GGAAGAGATT GGTTCGTCAT GCTTCCGCTT CGCCTCCCCC ACACGCCAGC CGTCCGTGAC GGTGAACCTA CGGTTCTGGG CGTGGATTTG GGCGTGGTGA AGCTGATGAC GGTGCTGACA CCGGACGGCG TGAAGATTTG GAACGGTCTG CCTGTGCGCC ATCGCCGGGA GAGATTCGCT GCTGTTCGTC GCCGCCTCCA GAGGCATCGC CGCACCGACC GCGTGAAGGC GCAGGGAGGG CGTGAACGCC GCTGGATGTC GGGGCTGAAC CACAAACTCA GTCGTGAACT CGTTGACCTT GCCCGCTTCT ACAAGGACGC GGTCATCGCC TTTGAGCAGC TGGACGGGAT TCGTGACCGG GTACGGGGCA GCAAGAAGTT CAACCGGATG ATGAGCAGCT GGACGTTCCG TGACCTCGTG GACAAGGTGC GGTACAAGGC GGAAGCGGCT GGGGTGGGCG TGGTCTTCGT TGACCCGCGC AAGACTTCCC AGACCTGCCA CCGCTGCGGA CATGCCACGC GGAGTAACCG GACGTCTCAG GCTGAGTTTC GATGTGTGAA CTGCGGATTC AGGACGAATG CGGACTGGAA CGCGGCCACC AACATCGCTG CTGCCGGGCT GCGTGCCTTG CAGCAGGGGC CGACTGACAC GGCCCGCTCT GCTCACGCAG AGCAGGCGTC GTCCTCGTTG ACGGCGCTCG ATGGAGTAAA GGTGCGCGAG GCGCAAGTTT CGCACACAGA CTCCAACCTC GTAAGCCCCG CGTAG
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Protein sequence | MHRAETVILK LAAPSANKRA WLSQTAQAFR DGVGMVLGVA ESEKTGSRAK LHNACYAAIR EETGLPSDYA RMAVNAGVAL ARSYWALRKG KRRPSFPKVG KSQGIGLGVN AYAVLKRGER FFLRASTGKR GSYKWFPLSV PVHLASKLEF VHGDAKLFQR GRDWFVMLPL RLPHTPAVRD GEPTVLGVDL GVVKLMTVLT PDGVKIWNGL PVRHRRERFA AVRRRLQRHR RTDRVKAQGG RERRWMSGLN HKLSRELVDL ARFYKDAVIA FEQLDGIRDR VRGSKKFNRM MSSWTFRDLV DKVRYKAEAA GVGVVFVDPR KTSQTCHRCG HATRSNRTSQ AEFRCVNCGF RTNADWNAAT NIAAAGLRAL QQGPTDTARS AHAEQASSSL TALDGVKVRE AQVSHTDSNL VSPA
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