| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0635 |
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| Symbol | |
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| ID | 4057600 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 685249 |
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| End bp | 689862 |
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| Gene Length | 4614 bp |
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| Protein Length | 1537 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641229650 |
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| Product | DNA-directed RNA polymerase, subunit beta-prime |
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| Protein accession | YP_604106 |
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| Protein GI | 94984742 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02386] DNA-directed RNA polymerase, beta' subunit, predominant form |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAAGACT TCAGCAAGGT CCGTATCGCC ATCGCCAGCC CCGCGAAGAT TCGCGAGTGG
AGCTTTGGTG AGGTGGAAAA GCCGGAAACC ATCAACTACC GCACCCTGAA GCCCGAGCGC
GAAGGGCTGT TTGACGAGCG CATCTTCGGG CCCATCAAGG ATTACGAGTG CGCCTGCGGC
AAGTACAAGC GCCAACGCTA CGAGGGCAAG GTCTGCGAAC GCTGTGGCGT CGAGGTGACC
TCCTCCAAGG TGCGCCGCTA CCGCATGGGC CACATCGATC TGGCGACGCC CGCCGCGCAC
ATCTGGTATG TGAAGGACAC GCCGAGCAAG ATCGGCACGC TGCTTGACCT GTCGGCGGCG
CAGCTGGAAA AGGTGCTGTA CTTCAGCTCC TTCCTGGTGA CCGATCCGCG CAACGCGCAG
AAGGACGGCC GTCCCCTGCG CCGAGGCGAA CTCCTCAGCG ACGACGAGTA CCGCGAGCTG
CGCTTCGGGC GGCAGGAGAC GTACACGCTG CCCAGCGGCA CCGAAGCGGC GGTGCGTGAC
GGCGAGTATG TGACGCGCGG ACAGGTGCTG GGCGGCAACG TGGTCAGCAA GATGGACGGC
CTCGCGCAGT ACCGCTTCCC GCGCCGCGCC GAGATCGCCT ACGCCGAGGA GGCCGAGGCC
AGTCTGCCCC TGCCCAGCGA CGTGCTGGTG CAGCAGGACA GTTTCCGCCC CGGCGAGATT
CTGGCCGAAC TCGAGGGGGA CGTGCAGATC ACTGCTCCGG TAGACGGCAC GGCTTTCTTG
CTCGACATGG GCGAGGACAG CGTGCTGGTG GAGCTGCGTG ACAGCGCCGC CGAGGATGCT
GCACAGGGCG AGGTGCTGGC CCGCGTGTAT ATCCCACATG GCATGAACGT GCAGGTGGCC
GAGGGCGAGG TGGTCGAAGC CGGAAGCGTG CTGGCGACCG CCGCGGCCGG AGATCGCCTG
CGTGTGAGCC GCGACAGCCG CCTCAGCAAT GTCAACTTCC CCAAGAAGAA GGGGGACGTC
AAGGTCACGG CACACTGGAC CCGCCGCGTC GAGTACCGCA TCGAACCGCA GATGCACGTG
CTTGTCGGGG ACGGCAGCGA GGTCCGCAAG GGCCAGAAGG TCGTCGGCGC GATTGATAAG
GAAGAAGAGG TCATCGCGGA AGCCGACGGC GTCATCACTC TGCACGCGCC CGCCTCGATT
ATTGTCAGCA AGGCCCGGGT GTACGCTTAC CAGGACGAGC CGCTCGTGGT GAATGGCGAC
CGGGTGGAGC CGGGGGACGA GCTGGCCGAC TCGGGCAACC TGCGCTCGGA GATCTCGGGC
CGGGTGGAGA TCGATCTGGT GCGCAAGCAG GTGCGCGTGA TTGAGTCCTA CGACTTCGAG
GCCAAGATGG GCGCCGAAGC CGTCAAGGAG CTGCTCGACG ATCTGGACCT CGACCAGCTC
GAAGCTGAGC TGAGCGAGCA GATGAAGGAC AACAGCCGCC ACAAGCGCGC CAAGGCCCGC
AAGCGGCTGG AAGTTGTGCG CGCCTTTAAG CGCAGCGGCA ACCACCCCTC CTGGATGATC
CTGGAGACGG TGCCGGTGAT GCCGCCTGAC CTGCGCCCGA TGGTGCAGGT GGACGGCGGG
AGATTCGCGA CTTCGGACCT CAACGACCTG TACCGCCGCC TGATCAACCG CAACAACCGC
CTGAAGAAGC TCATTGGGCA GGGCGCGCCC GACATGATCA TCCGCAACGA GAAGCGCATG
CTTCAGGAGG CGGTGGACGC CCTGATTGAC AACGGGCGGC GCGGCTCACC CGTCACCAAC
CCTGGTTCTG ACCGCAGCCT GCGTTCCTTG ACCGACCTGC TGGGTGGCAA GCAGGGCCGC
TTCCGGCAGA ACCTGCTGGG CAAGCGCGTG GACTACTCGG GTCGAAGCGT GATCGTGGTC
GGCCCGCAGC TCAAGCTGCA CCAGTGCGGC GTGCCCAAGC GGATGGCACT CGAACTCTTC
AAGCCCTTTC TGTTCAAGGT GCTCGAAGAA AAGGGTGAGG TCACCAACAT CAAGCAGGCC
CGCAAGATGC TAGAGCGGTA CCGCGACACC CGTGACTCTG TGTGGGACGC ACTGGAAGAG
GTGATTGAGG ACAAGGTCGT GCTGCTCAAC CGCGCCCCGA CCCTGCACCG CCTCGGTATT
CAGGCGTTTG AGCCGGTGCT GGTCGAGGGG CAGTCCATCC AGCTGCACCC GCTGGTCTGT
GAAGCCTTCA ACGCCGACTT TGACGGCGAC CAGATGGCGA TTCACGTGCC GCTCTCGGCG
CAGGCGCAGG CCGAAGCGCG GATCCAGATG CTCTCCGCGC ATAACCTGCT CTCGCCCGCG
AACGGCGAGC CGAACGTGAA GCCCTCCCGC GACATCATCC TGGGCATCTT CACGCTGACG
CAACTCCGCA AAGACAACCT GGGCGCCGGG AGCGAGTTCG CCAACGAGCA AGACGCGCTG
AAGGCGCTCG ACGAGGGCCG CGTGGCCCTG AACACGCCCA TCCGAGTGAA CGGTGTGGAA
ACCAGTCCTG GTCGCCTGAA GTACGTCTTC AGCTCGCCGG ATGAGGCGAT CATGGCCGTG
GACCGCGGCG AGATCGATTA TCAGGACCAT GTCCGCATCC GCCTGAACGG GACGGTGTAC
GAGACCAGCG CGGGCCGCGT GATGTTCCGC CGACTCGTGC AGGAGGCGCT GGGAGCGCAG
GGGCACCTGG TGGATACCCT GGTGAACCTG GACACGGCCT ACGAGAAAGA CAGCCTCAAG
GACATGGTGA TGGCCTGCTA CAAGGAGCTG GGCATCGAGG CGACGGCAGG CCTCTTGGAC
GCGCTCAAGG ACAGCGGCTT CAAGCTGTCT ACCATCTCCG GGATCACCAT CGGCATCGAT
GACATCGTGC TGCCGCCCAA CAAACGCGAA CTGCTGGCAG AAGCCGACGA GAAGCTGGCG
GCCATCGAGC AAAACTACGA GTTCGGCTTC ATGACCGACG AGGAGCGCTA CAAGCAGGTC
GTGCAGCTGT GGAACGACAC CACGGATGAG GTGAAGAACG CGGTGTTCGA GAACTTCAGC
CGCAACTACC CCTTCAATCC CCTCTGGATC ATGAGCCAGT CGGGTGCCCG TGGGAATCCG
CAGCAGATTC GCCAGCTCGC CGGGATGCGC GGCCTGATGG CCCGCCCCGA CGGCAGCACC
ATCGAGGTGC CCATCCGTGC CTCGTTCCGC GAGGGCCTGA CGGTGCTGGA GTACTTCATC
TCCACCCACG GCGCCCGTAA GGGTGGTGCC GACACGGCAC TCCGTACCGC CGACTCGGGT
TACCTGACCC GCAAGCTGGT GGACGTGGCC CACGAGGTCG TCGTGCGCGA CGTGGACTGC
GGGACCACCG ACTACACGGT GATGCCGCTG GGCACGACCG ACGAGCGCAC CGGCGAATGG
CGCACCCGCA AGGGCAGTGA GATCGAGACC GCGATCTATG GCCGCACCCT GACGGCTGAC
GTGGAACTGT CGGATGGCCG CGTGATCCCG GCCGGCCAGA TGCTGAGCCT GGAGGACGTG
AAGGCGATCA CCCGCGACGC GAAGGCCATT GGCGAGGTGT TTGTGCGCAC GCCGCTGAAC
TGCCGCGTCC GCGCCGGGGT CTGCCAGAAG TGCTACGGCT ACGACCTCTC GCAGGCCAAG
CCGGTGTCCT TGGGCGAGGC CGTGGGCGTG GTAGCTGCCG AATCCATCGG CGAACCCGGC
ACTCAGCTCA CCATGCGGAC TTTCCACACC GGTGGTGTGG CGGGCGGCGG CGACATCACG
ATGGGTCTGC CGCGCGTGAT TGAGCTGTTC GAGGCGCGCA AGCCTAAGAC TCAGGCCGTG
GTGGCCGACC GTGACGGGGT GGTGCGCATC GAGGAGGAGG AGGAACGTTA CCTGGTCCGC
ATTGAGGCCG AGGACGAAGC CTTCAGCTCC AAGACACCGA TGAAAATCAG CAAGAGCCTG
CGCCTGATTG TGCGCGACGG CGACCACGTG GAAGCCGGGC AGCCGCTCAC ACGCGGCGCG
ATCAATCCCC ACGACCTGCT GCTGTACAAG GACACCGACG CCGCCCAGCG GTACCTGGTG
GAGGAAGTGC AGCGCGTGTA CCGCTCGCAG GGCGTGAAGG TGCATGACAA GCACATCGAA
GTGATCGTGC GCCAGATGCT GCGCTACGTC GAGATCACCG ACGGCGGCGA CACCGACCTG
CTTGAAGGGC AGACGGTCGA GCGCTGGGAA GTCGACCAGG CAAACGATGC CCTGCCCGAG
GGCAAGACGC CTGCGAGCTG GAAGCCGGTG CTGCTGGGCA TCACCAAGAG CAGCCTGACC
ACCAAGAGCT GGCTGTCGGC TGCCTCCTTC CAGCACACGA CGCACGTGCT GACGGAAGCT
TCGATGCGCG GGCAGGTCGA CGAACTGATC GGCCTCAAGG AGAATGTGAT TCTCGGCAAG
CTGATCCCGG CGGGCACGGG TCTCACCACC GTCCGCGAGA TGCAGGTGGC CGACGAGCGC
ACCCTGGAGA AGTATGGCCA GACGAGCGTC AGCACAGATG CCGTGACCGG CAGCCAGCGC
TACGACGACA CCCGCCCGAG CAGCACCTCC ATCAACCCCA GCTACGGCGA CTGA
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| Protein sequence | MKDFSKVRIA IASPAKIREW SFGEVEKPET INYRTLKPER EGLFDERIFG PIKDYECACG
KYKRQRYEGK VCERCGVEVT SSKVRRYRMG HIDLATPAAH IWYVKDTPSK IGTLLDLSAA
QLEKVLYFSS FLVTDPRNAQ KDGRPLRRGE LLSDDEYREL RFGRQETYTL PSGTEAAVRD
GEYVTRGQVL GGNVVSKMDG LAQYRFPRRA EIAYAEEAEA SLPLPSDVLV QQDSFRPGEI
LAELEGDVQI TAPVDGTAFL LDMGEDSVLV ELRDSAAEDA AQGEVLARVY IPHGMNVQVA
EGEVVEAGSV LATAAAGDRL RVSRDSRLSN VNFPKKKGDV KVTAHWTRRV EYRIEPQMHV
LVGDGSEVRK GQKVVGAIDK EEEVIAEADG VITLHAPASI IVSKARVYAY QDEPLVVNGD
RVEPGDELAD SGNLRSEISG RVEIDLVRKQ VRVIESYDFE AKMGAEAVKE LLDDLDLDQL
EAELSEQMKD NSRHKRAKAR KRLEVVRAFK RSGNHPSWMI LETVPVMPPD LRPMVQVDGG
RFATSDLNDL YRRLINRNNR LKKLIGQGAP DMIIRNEKRM LQEAVDALID NGRRGSPVTN
PGSDRSLRSL TDLLGGKQGR FRQNLLGKRV DYSGRSVIVV GPQLKLHQCG VPKRMALELF
KPFLFKVLEE KGEVTNIKQA RKMLERYRDT RDSVWDALEE VIEDKVVLLN RAPTLHRLGI
QAFEPVLVEG QSIQLHPLVC EAFNADFDGD QMAIHVPLSA QAQAEARIQM LSAHNLLSPA
NGEPNVKPSR DIILGIFTLT QLRKDNLGAG SEFANEQDAL KALDEGRVAL NTPIRVNGVE
TSPGRLKYVF SSPDEAIMAV DRGEIDYQDH VRIRLNGTVY ETSAGRVMFR RLVQEALGAQ
GHLVDTLVNL DTAYEKDSLK DMVMACYKEL GIEATAGLLD ALKDSGFKLS TISGITIGID
DIVLPPNKRE LLAEADEKLA AIEQNYEFGF MTDEERYKQV VQLWNDTTDE VKNAVFENFS
RNYPFNPLWI MSQSGARGNP QQIRQLAGMR GLMARPDGST IEVPIRASFR EGLTVLEYFI
STHGARKGGA DTALRTADSG YLTRKLVDVA HEVVVRDVDC GTTDYTVMPL GTTDERTGEW
RTRKGSEIET AIYGRTLTAD VELSDGRVIP AGQMLSLEDV KAITRDAKAI GEVFVRTPLN
CRVRAGVCQK CYGYDLSQAK PVSLGEAVGV VAAESIGEPG TQLTMRTFHT GGVAGGGDIT
MGLPRVIELF EARKPKTQAV VADRDGVVRI EEEEERYLVR IEAEDEAFSS KTPMKISKSL
RLIVRDGDHV EAGQPLTRGA INPHDLLLYK DTDAAQRYLV EEVQRVYRSQ GVKVHDKHIE
VIVRQMLRYV EITDGGDTDL LEGQTVERWE VDQANDALPE GKTPASWKPV LLGITKSSLT
TKSWLSAASF QHTTHVLTEA SMRGQVDELI GLKENVILGK LIPAGTGLTT VREMQVADER
TLEKYGQTSV STDAVTGSQR YDDTRPSSTS INPSYGD
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