Gene Dgeo_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0473 
Symbol 
ID4059185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp487002 
End bp488405 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content63% 
IMG OID641229484 
ProductFeS assembly protein SufB 
Protein accessionYP_603944 
Protein GI94984580 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0344639 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACC CCGAAGTTGC CAACATCAAC GCCCAGTACG AATACGGCTG GAGCAACCCC 
GAGCGCTACG CCGTCAAGGC GCCCAAGGGC CTTTCCCGCG AAGTCGTCGA GATGATCTCC
AAGGCCAAGG ACGAGCCGCA GTGGATGCTC GACTTCCGCC TCAAGGCGCT CGACATCTTC
CTGTCCAAGC CCATGCCCAC CTGGGGCGCG GACCTCTCGG GGCTGAACTT CGACGAGATC
TACTACTACA TCAAGCCCGA AGGCTACAAC GCCCGTTCCT GGGACGATGT GCCCGAGGAC
GTGAAGCAGA CCTTCGAGCG CCTGGGCATC CCCGAAGCCG AGCGCAAGGC GCTGGCGGGC
GTAGGCGCCC AGTACGAGTC CGAAATGGTG TACCACAACC TCAAGGAGGA GTGGGAAAAG
CTGGGCGTCG TGTTCCTCTC CATCGAGGAC GGCCTGAAAC AGTACCCGGA CCTCTTCCGC
GAGCACTTCG CCACCGTCAT CCCGCCGGAG GACAACAAGT TCGCGGCCAT CAACTCCGCC
GTGTGGTCGG GCGGTTCCTT TGTGTACGTG CCCAAGGGCG TGAAGGTGGA CATTCCCCTT
CAGACGTACT TCCGCATCAA CGCGGAGTCG AGCGGCCAGT TCGAGCGCAC CCTGATCATT
GTGGACGAGG GCGCGCAGGC CCATTACATC GAGGGCTGCA CCGCCCCGAC CTACGCCAGC
GATTCCTTCC ACTCCGGCGT AATCGAGATC ATCGTCAAGG AAGGCGCGCG CTTCCGCTAC
TCCACCATCC AGAACTGGAG CCACAATGTC TACAACCTCG TGACCCAGCG CGCCGCCGTG
TACCGAAACG GCGTGATGGA GTGGGTGGAC GGCAACCTCG GCTCCAAGGT CACGATGAAG
TACCCCGCCT GCTACCTCCT CGAAGAGGGC GCGCGCGGCG AGGTGCTCTC CATCGCGATG
GCAGGCCGTG GCCAACACCA GGATGCCGGG GCGAAGATCG TGCACTTCGC GCCGCACACC
AGCGGCACCA TCGTCTCCAA GTCGATCTCC AAGGACTCGG GCCGCTCCTC GTACCGGGGC
CTCGTCAAGA TTTACGAGGG GGCCTATGGC AGCAAGACGA ATGTCGAGTG TGACGCCCTG
CTGCTCGACG AAGAAGCCCG CACCGACACC TACCCCTACA TTGAGATCGA AGAGAAGGAC
GCCAGCGTGG GCCACGAGGC GACCGTCTCC AAGATCAACG ACGAGCAGAT CCTGTACCTC
CAGTCGCGCG GTCTCTCTGA AGACGAGGCG GCGGGCCTGA TTGTGCGGGG CTTTATCGAG
CCGATCGCCA AGGAACTGCC GCTGGAGTAC GCGGTGGAGC TCAACCGCCT GATCGAACTC
GAAATGGAAG GCAGCGTCGG CTAA
 
Protein sequence
MTNPEVANIN AQYEYGWSNP ERYAVKAPKG LSREVVEMIS KAKDEPQWML DFRLKALDIF 
LSKPMPTWGA DLSGLNFDEI YYYIKPEGYN ARSWDDVPED VKQTFERLGI PEAERKALAG
VGAQYESEMV YHNLKEEWEK LGVVFLSIED GLKQYPDLFR EHFATVIPPE DNKFAAINSA
VWSGGSFVYV PKGVKVDIPL QTYFRINAES SGQFERTLII VDEGAQAHYI EGCTAPTYAS
DSFHSGVIEI IVKEGARFRY STIQNWSHNV YNLVTQRAAV YRNGVMEWVD GNLGSKVTMK
YPACYLLEEG ARGEVLSIAM AGRGQHQDAG AKIVHFAPHT SGTIVSKSIS KDSGRSSYRG
LVKIYEGAYG SKTNVECDAL LLDEEARTDT YPYIEIEEKD ASVGHEATVS KINDEQILYL
QSRGLSEDEA AGLIVRGFIE PIAKELPLEY AVELNRLIEL EMEGSVG