Gene Dgeo_0450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0450 
Symbol 
ID4059163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp463146 
End bp464174 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID641229462 
Producttryptophanyl-tRNA synthetase II 
Protein accessionYP_603922 
Protein GI94984558 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0180] Tryptophanyl-tRNA synthetase 
TIGRFAM ID[TIGR00233] tryptophanyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.481954 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAAAC CCCGCATCCT CACCGGCGAC CGCCCCACCG GCCCCCTCCA CATCGGCCAC 
TATGTCGGCT CGCTGCGTAA CCGGGTCGCC CTGCAGCATG ACTACGACAC CTACATCCTG
ATCGCAGACG TGCAGGCCCT CACCGACAAT TTCGAGAACC CGCGCAAGGT GCGTCAGGCC
GTGCTGGAGG TCGCCCTCGA CTACCTGGCC GTCGGCCTGG ACCCGGCGGT CACAACCTTC
GTGATCCAGT CGCAGGTACC TGAGATCGCG GAGCTGACCG TCTTCTATCT CAACCTCGTC
ACGGTGTCGC ACCTGCGGCA GAACCCCACC GTCAAGACCG AGATCGCGCA AAAGGGCTAC
GGCGAGGCGG TCCCGGCCGG GTTCTTCGTG TATCCCGTCT CGCAGGCGGC GGACATCACG
GCGTTTGGCG CACACCTCGT ACCTGTCGGG GAAGACCAGC TCCCGATGAT CGAGCAGACC
CGCGAGATCG TGCGGCGCTT CAACCACCTC TACGCGCCCG TGCTCGTTGA GCCGCAGGCA
CTCGTGGGTG AAGTGGCCCG CCTCCCCGGC CTGGACGGCA AGGCCAAGAT GAGCAAGTCG
CTCGGCAACG CGATCTTCCT CTCCGACAGC GCAGACGAGG TGGCCCGTAA GGTGCGCGGC
ATGTACACCG ACCCGGGCCA CCTGCGGGTG GAAGACCCCG GCCAGGTCGA GGGCAACCCG
GTCTTCGCTT ACCTCGACGC CTTCGATCCT GACCGGGCGC GCGTGCAGGC CATGAAGGAC
CACTACCGCC GCGGTGGCCT AGGCGACGTG AAGGTCAAGC GGCATCTGCT GGAGGTGCTG
GAAGCCACCC TCGCGCCCAT CCGTGCCCGC CGCGCCGAGT TTGCGCAGGA CATGGCGGCG
GTGGAAGCCG TCGTGCGCGA AGGCACCGAG CGGGGCCGCG ACGTGGCCGC CGCAACCCTG
CGGGCGGTGC GGGCAGCCAT GCAGCTGGAC TACTTTTCCA ACACCCTTCA CCCTCAGCCC
AAGCCCTAG
 
Protein sequence
MTKPRILTGD RPTGPLHIGH YVGSLRNRVA LQHDYDTYIL IADVQALTDN FENPRKVRQA 
VLEVALDYLA VGLDPAVTTF VIQSQVPEIA ELTVFYLNLV TVSHLRQNPT VKTEIAQKGY
GEAVPAGFFV YPVSQAADIT AFGAHLVPVG EDQLPMIEQT REIVRRFNHL YAPVLVEPQA
LVGEVARLPG LDGKAKMSKS LGNAIFLSDS ADEVARKVRG MYTDPGHLRV EDPGQVEGNP
VFAYLDAFDP DRARVQAMKD HYRRGGLGDV KVKRHLLEVL EATLAPIRAR RAEFAQDMAA
VEAVVREGTE RGRDVAAATL RAVRAAMQLD YFSNTLHPQP KP