Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0236 |
Symbol | |
ID | 4059144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 220910 |
End bp | 221887 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 641229236 |
Product | CRISPR-associated Csd2 family protein |
Protein accession | YP_603708 |
Protein GI | 94984344 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3649] Uncharacterized protein predicted to be involved in DNA repair |
TIGRFAM ID | [TIGR01595] CRISPR-associated protein, CT1132 family [TIGR02589] CRISPR-associated protein, Csd2 family |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGA CCTCTTCCCC CCTCCGCAAC CGTTATGAGT TTCTGCTGCT GTTCGACGTG GAAAATGGCA ACCCGAACGG CGACCCCGAC AGCGGCAATG CCCCCCGCGT AGACCCCGAA GACGGCCACG GTTTGGTCTC GGATGTGGCC CTGAAGCGCC GCGTGCGCAA CTACGTTCAG GCAGCGGGCG AACAGATTTT TATTCAGCAC GGCACCAACC TCAACCGGCC CATCTTCCAG GCCAAACAGG CAAGCGGCGG CGGCAGCAAG GGCAAACAGG ACGTGGATGC GGCGCGGCGG TGGATGTGTG AGCACTTCTA CGACGTCCGG ACCTTTGGCG CCGTGATGAG CACAGGGGCC AACGCCGGAC AGGTGCGCGG CCCGGTGCAA TTGACCTTTG CCCGCAGTCT TGATCCGGTG TTTGCCATCG AGGCCAGCAT CACCCGCGGG GCCGTGGCGG AAGACATCAA GAATGCCAAA ACACTGGACG ATTTTTTGAA TTGGGAAGCT CAGCAAGACG AAGACAAACT CCGCACGATG GGCCGCAAGA GCCTGATTCC CTATGGCCTC TTTGCCACCA AGGGCTTTGT GAGTGCCCAT CTCGCGCAGG GCACCGGTTT CAGTGAGGCT GACCTCAAGC TGCTTCTCGA AGCCCTTCTG AACATGTACG AGCACGACCG CAGCGCGAGC AAGGGGCTGA TGAGTAGCCG CCGCCTCTTC GTGTTCCGGC ACGTGGGCAC GGACAGCGAT CCGCAGCAGC GCGCCCGTCA GGCTGTGCTG GGCTGCGCTC CGGCCCACAA ACTCCTCGAT CTGGGACAGG TGATCGAGGT CCGGCGCAAA GATGAACACA AGCCGGCCCG TGCCCTCAGC GACTACGAGG TGACGGTGCA CCTTGACCGC CTTCCGGCGG GCGTTGAGTT GTTGGACCTG GACAGCTGGG ACGAGGCTCG GTATCACGAC GGCTGGCAAT CCCGGTAG
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Protein sequence | MTQTSSPLRN RYEFLLLFDV ENGNPNGDPD SGNAPRVDPE DGHGLVSDVA LKRRVRNYVQ AAGEQIFIQH GTNLNRPIFQ AKQASGGGSK GKQDVDAARR WMCEHFYDVR TFGAVMSTGA NAGQVRGPVQ LTFARSLDPV FAIEASITRG AVAEDIKNAK TLDDFLNWEA QQDEDKLRTM GRKSLIPYGL FATKGFVSAH LAQGTGFSEA DLKLLLEALL NMYEHDRSAS KGLMSSRRLF VFRHVGTDSD PQQRARQAVL GCAPAHKLLD LGQVIEVRRK DEHKPARALS DYEVTVHLDR LPAGVELLDL DSWDEARYHD GWQSR
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