Gene Dgeo_0228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0228 
Symbol 
ID4059136 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp214016 
End bp215086 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content66% 
IMG OID641229228 
Productbifunctional nicotinamide mononucleotide adenylyltransferase/ADP-ribose pyrophosphatase 
Protein accessionYP_603700 
Protein GI94984336 
COG category[F] Nucleotide transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG1051] ADP-ribose pyrophosphatase
[COG1056] Nicotinamide mononucleotide adenylyltransferase 
TIGRFAM ID[TIGR00125] cytidyltransferase-related domain 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.853953 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGCTC CGCATGACCC GGCCCTGACC TCTCCCCCGC CGCGCACCCG CAAACGCACC 
TTTGGCGTGT ACATCGGCCG TTTCGAGCCG CCACACCAGG CCCACCTGTT GGTGATGCTT
GAAGCGCTGC AATGGGTCCA AAAGCTGATT GTGGTGATCG GCAGCGCGCG GGCCGCCCGC
AACACCAAGA ATCCTTTCAC GGCCGAAGAA CGGCAGGAGA TGATCACGGC GATGCTGCGA
GAAGCGGGCG TGGCAAAAAG CCGCCTGCTC TTCGTGCAGG TGCGCGATTC CTTCTACAAC
GAGGGGCTGT GGCTCTCAGA GGTGCAGCGC GGTGTGGCCG AACACACCCG CGGCAGCAGC
GACGTGGCCC TGATCGGACA CTTCAAGGAC GAGAGCAGCT ATTACCTGCG TTCCTTTCCC
GCCTGGGAGT TCCTGCCCAC CCACGTGGTG AGTCCTCTGA ATGCCACGGA CGTGCGAAAA
GCCTTGTTCG AGGACCGCTT GGACGAGGTG CGCAGCATGG TGCCGCCCAC CGTCCACGCC
TTTCTCAGCG CTTTTCGGCA GACGCCGGCG TACGCTGAAC TCCGCAGCGA GTACGACGAC
CTGCGCGAGT CCCGCGCGGC GTGGCTTGGC GCACCCTTTC CCCCGGTCTT CGTGACGGCC
GACGCGGTGG TGACGCGCAG TGGACACGTT CTGGTCGTGC GGCGGGCCGG ATTCCCAGGG
CGCGGGCGAC TCGCCATGCC GGGCGGCTTT CTGAGGCCAG ACGAGACCCT GCTCGCCTGT
GCCGTCCGCC AGGTCCACAG CGAAACCGGG CTGAACGCGG CGGTCAACCT CACCGAGCGG
GTGCGTTCCC AGGCGGTCTT TGACTATCCG GGCCGCAGCC AGCGCGGGCG AACCGTGACG
CACGCCTTTC ACTTCGACCT CGGCCTCGGA CAGCTCCCAG TGCTGCAGGC CGCTGCGGGA
GCCGCCGAGG CGTTCTGGAT GCCGTTCTCG GAAGCCCTCG CGGAGCCGGA ACTGTTTTTC
GAGGACCACC ACGCGATCAT CGAGTCCTTT CTGATGCGCG GGAAACTGTA G
 
Protein sequence
MTAPHDPALT SPPPRTRKRT FGVYIGRFEP PHQAHLLVML EALQWVQKLI VVIGSARAAR 
NTKNPFTAEE RQEMITAMLR EAGVAKSRLL FVQVRDSFYN EGLWLSEVQR GVAEHTRGSS
DVALIGHFKD ESSYYLRSFP AWEFLPTHVV SPLNATDVRK ALFEDRLDEV RSMVPPTVHA
FLSAFRQTPA YAELRSEYDD LRESRAAWLG APFPPVFVTA DAVVTRSGHV LVVRRAGFPG
RGRLAMPGGF LRPDETLLAC AVRQVHSETG LNAAVNLTER VRSQAVFDYP GRSQRGRTVT
HAFHFDLGLG QLPVLQAAAG AAEAFWMPFS EALAEPELFF EDHHAIIESF LMRGKL