Gene Dgeo_0200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0200 
Symbol 
ID4058446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp184526 
End bp185497 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content72% 
IMG OID641229200 
Productpolysaccharide pyruvyl transferase 
Protein accessionYP_603672 
Protein GI94984308 
COG category[S] Function unknown 
COG ID[COG2327] Uncharacterized conserved protein 
TIGRFAM ID[TIGR03609] polysaccharide pyruvyl transferase CsaB 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.666339 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGGTCG CCGTCAGCGG CTACTACGGG TTCGGCAACA CCGGGGACGA GGCCATCGCG 
CTGGCGATCA CCCGCGAACT GAAACGACAG GGAGCGGTGC CGCTCCTCCT TTCCCAGACG
CCCGCCGAGA CGGCCCGCGC CTACGGCTGC GAGAGTGCCG CACGCATGAA CCCCGCGGCG
CTGCTGGGTG CGCTGGCCCG TTCCCAGGTG CTGCTGTCGG GGGGCGGAGG CCTCTTGCAG
GACAAGACCA GTGCCCGTAC CCTTCAGTAC TACCTGGGCG TCATCCAGCT GGCGCGGCGG
CTGGGGAGGC GGGTGGTCAT CTTCAACCAG AGCATCGGAC CGCTGAGCGA GGCAGGCGGG
CGCCGGGTGG CGGCGGCGCT GCGGGGCCTG CGGGTGATTG TGCGCGACCG GGGCAGTCTG
GACACGCTGC GGGCGCTGGG CATCGAGGGC GAACTGGGAG GCGACCCAGC GCTGCTGCTC
TCCCCCACGC CCGGCCTGGA CCAGGACACC CAACGGGTCA TCGTGGCACC GCGGGGCGAC
GTGACGGATG CAACGGAAAG GCTGAAGACG GTCACCGCCC ACCTGCGCGC ACAGGGGCGA
CGCGTCACCG CTCTGGCTTT GATGCCGGAG CAAGATGATC CGGCGGCGCG CAGCCTGGGG
GCGGACGAGG TGCTCAGCAC CCGTGATCCA CAGGCCGCGC TGGATGCCAT CGCCGCCGCG
GGCTTTGTGG TTGGTGTGCG GCTCCACGCG GTGATTCTGG CCGCCGCCGC CGGGGTCCCC
TTCGCCGGCG TCAGCTACGA CCCCAAGGTG CAGGGCTTCT GCGCGGACGC GGGCGCCCCC
GCCTGCCCGA CGGCCTTTGA CCCCACGGAC CTCTCTCAGC AGGCCCTGGC GCGGACCGCG
CCCGACTGGG CGGCAGTGGC CGAGATGCAG GCGCGGGCGG CGCGGAGTTT TACGCGGGCG
CTGGCCGAAT AG
 
Protein sequence
MRVAVSGYYG FGNTGDEAIA LAITRELKRQ GAVPLLLSQT PAETARAYGC ESAARMNPAA 
LLGALARSQV LLSGGGGLLQ DKTSARTLQY YLGVIQLARR LGRRVVIFNQ SIGPLSEAGG
RRVAAALRGL RVIVRDRGSL DTLRALGIEG ELGGDPALLL SPTPGLDQDT QRVIVAPRGD
VTDATERLKT VTAHLRAQGR RVTALALMPE QDDPAARSLG ADEVLSTRDP QAALDAIAAA
GFVVGVRLHA VILAAAAGVP FAGVSYDPKV QGFCADAGAP ACPTAFDPTD LSQQALARTA
PDWAAVAEMQ ARAARSFTRA LAE