Gene Dgeo_0184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0184 
Symbol 
ID4058430 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp172510 
End bp173682 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content65% 
IMG OID641229182 
Productputative signal transduction histidine kinase 
Protein accessionYP_603656 
Protein GI94984292 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.709555 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.941469 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGCGC GCAAGCAGAA AATGAACCCC TGGGACTTCT TCCCGCTGTT GTGGCTGGTG 
TTCCTGAGTT TCCCCGTGAT GGGATTTTTG GAAAAAGACC ACACATTCAG CCAGACAGCC
CTGTTTTGGG GGCTGATCAC GGGTTTCTTG GCAGTCTATT GGCGCGTTTT CATGTGTCCA
AGCTCCGAAC GCCAGGCGCT CATCAGCTGG GCCTACACCT TGCTGACCTA CCTGCTGCTG
TTTCCGGTCA TTGGGGGCAC AGCCAGCGCT TTTTTGATCT ACGGCGGCAG CATGATCGGC
ATGCAGAGCA GCATGGCAGC CGCACTCTGG CTGGCCTTTT TGAACGCCGC CGTGATGGTC
TTGCCGTTTT GGACCGGACA GTACACCGCA GACGACTTGG GCTGGCTGGT CACAAACGCC
ATCTTTACGC TGGTGGCCGC CTACGCCAAC CACGCCAGCT ACCGCCAGCG AATGACCAGC
CGCCGCCTTG CCGAAGTGCA GGCCGAGAAG GAGGCTCTGG CCGCCGATGC CGAGCGCGAG
CGCATCGCCC GCGACCTGCA CGACCTGCTG GGGCATACCC TGTCGGTCAT TGTGCTGAAA
AGCGAACTGG CGAGCAAACT GGCCCAGCGT GACCCGGCCC GCGCCGTCCA GGAGATCCGT
GAAGTGGAGC GCATCAGCCG GGAGGCCCTC TCAGAGGTGC GCGCGGCGGT GAGCGGCTAC
CGGGGCAGCG GGCTGAAGGC CGAACTCGCC CGCGCAAAGG TGGCCCTCGA TGCCGCGGGG
GTCCGCTTGG AATATGGTGG CCAGCCTGGC CCCCTCCCCC CTGAGGTCGA ACACGGCATG
AGCATGGTGC TGCGTGAGGC CGTCACCAAT GTGGTCCGCC ACGCCCACGC GCGCGAGTGC
CGGGTGAACA TCACCCGCGA GGGCGAACGC TACCGCCTAG AAATCGCAGA CGACGGGGTG
GGCGGCGCGG CCCCCGAGGG CACCGGCCTG ACCTCTATGC GCGAGCGGGT GCGGGCACTG
GGCGGCGAAT TCACGCGCGA CGGCACGCGG GGCACACGGC TGGTCGCCAG CTTTGTGGGC
ACGCAGGGGG GGAGTGTTTC TGGCCCTCTG CCCTCTCCTG CAGAACTTGC CAGTTCGGCC
CTCTCCACCC TGCCGCGCCG GAGGCCCCAA TGA
 
Protein sequence
MQARKQKMNP WDFFPLLWLV FLSFPVMGFL EKDHTFSQTA LFWGLITGFL AVYWRVFMCP 
SSERQALISW AYTLLTYLLL FPVIGGTASA FLIYGGSMIG MQSSMAAALW LAFLNAAVMV
LPFWTGQYTA DDLGWLVTNA IFTLVAAYAN HASYRQRMTS RRLAEVQAEK EALAADAERE
RIARDLHDLL GHTLSVIVLK SELASKLAQR DPARAVQEIR EVERISREAL SEVRAAVSGY
RGSGLKAELA RAKVALDAAG VRLEYGGQPG PLPPEVEHGM SMVLREAVTN VVRHAHAREC
RVNITREGER YRLEIADDGV GGAAPEGTGL TSMRERVRAL GGEFTRDGTR GTRLVASFVG
TQGGSVSGPL PSPAELASSA LSTLPRRRPQ