| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0174 |
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| Symbol | |
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| ID | 4058420 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 162924 |
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| End bp | 163826 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641229172 |
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| Product | substrate-binding region of ABC-type glycine betaine transport system |
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| Protein accession | YP_603646 |
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| Protein GI | 94984282 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1732] Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.335046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAGG TCCTCTGTCT CTCACTGGCT GTGCTGATGG GCAGCGCCGC CGCCAAACCT
ATTGTGGTGG GCAGCAAGCT CGACCCCGAG GCCCAGATTC TCGGGCAGAT GATCGTCTTG
ACGCTGCGCA ATGCCGGGCT GGAGGTGAGC GACAAGACCA ATCTGGGTGA TACCGGCGTG
AACCGCAAGG CGATTCTGGC GGGTGAGATC GACGTGTACC CCGAGTACAC CGGCAACGCG
GTGTATCTCT TTCCACAGGC CAAGATCAGC GCCAAGGATG CAGGGAATCC CGGCAAAATC
TACGGGTATG CCCGGCAGCT CGACGCCAAA AACGGCATCA CTTGGCTGAA GCCGGCCAAC
GTCAACAACA CCTGGGTGAT CGCCGTGCCG CAAGCGCTGG CACAACGGGA AAAGCTGAGC
AGCGTGGCCG ACCTGGCTCG CTACCTCCAG GCGGGGGGCC GCTTCAAGAT CGCCGGGAGT
CCCGAGTTCT TTAACCGCCC GGACACCATG CCCGCCTTTG AGGCTGCCTA CGGCTTCAAG
CTGCGACCCG ACCAGAAGCT GGTGTTGGCT GGGGCCACGC CGCCACAGAC GCAGCAGGCG
GCCGCCAACG GCACCAACGG TGTGAATGCT GCGATGGCCT ACGGCACAGA CGGCACCCTG
GCCGCGCTCA AATTGGTGGC CCTCAAAGAT CCCAAGGGCG CACAGGCGGT CTATCAGCCT
GCCCCGATCA TCCGCAGCGA GGTGCTCCAG GCTCACCCGG AGATCGGGAC ACTGCTCAAC
AAGACCTTTG CCACGCTCAC GCAAGCGGGG CTGCAAAGGT TAAATGCCCA GGTCGCGCTC
GAAGGCCGCA CCGCGCAGGA GGTGGCCCAA AGCTACCTCA AGAGCAAGGG GCTGATCAAG
TGA
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| Protein sequence | MSKVLCLSLA VLMGSAAAKP IVVGSKLDPE AQILGQMIVL TLRNAGLEVS DKTNLGDTGV
NRKAILAGEI DVYPEYTGNA VYLFPQAKIS AKDAGNPGKI YGYARQLDAK NGITWLKPAN
VNNTWVIAVP QALAQREKLS SVADLARYLQ AGGRFKIAGS PEFFNRPDTM PAFEAAYGFK
LRPDQKLVLA GATPPQTQQA AANGTNGVNA AMAYGTDGTL AALKLVALKD PKGAQAVYQP
APIIRSEVLQ AHPEIGTLLN KTFATLTQAG LQRLNAQVAL EGRTAQEVAQ SYLKSKGLIK
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