Gene Dgeo_0172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0172 
Symbol 
ID4058418 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp160687 
End bp161619 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID641229170 
ProductABC transporter related 
Protein accessionYP_603644 
Protein GI94984280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1125] ABC-type proline/glycine betaine transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.319596 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TGCAACACCT CGAAAAGCGT TACGGCGACG CCTTTGCCGT GCGCGACCTT 
AATCTCGTCT TTCCGGCGGG CGAACTCACC GCACTCCTCG GCCCGTCGGG GTGTGGCAAG
ACCACAACGC TGCGGATGAT CAACCGCCTG ATCGAACCGA CCGGGGGACG CGTCCTGCTG
GGAGGCCGCG ACACCCGCGA CTTCCGCCCG GAGGAGCTGC GGCGCGGCAT CGGCTACGTG
ATCCAGCAGA TCGGGCTGTT TCCCCACCTC ACCGTCGCGC AGAATGTGGC AACCGTTCCC
GAGCTGCTGG GCTGGGACCG CCGCCGCACG GCCCGGCGGG TGGACGAACT GCTGGAGCTG
GTGGGGCTCG ACCCCGCCCT GTACCGCACC AAGAAACCCG CCGAGCTGTC GGGTGGCCAG
GCGCAGCGGG TGGGTGTGGC GCGGGCGCTG GCCGCCGACC CACCGGTCCT GCTGATGGAT
GAACCCTTCG GTGCCCTGGA CCCCCTGGCC CGCGACCACC TCCAGGAGGC TTTCCGGGAA
ATCCAGCGGC GCCTCAACAA GACCGTGGTG CTTGTCACCC ACGACATCGA CGAGGCGCTG
CGCCTCGGCG ACCGGGTCGC GCTGATGCGG GCGGGCAGTC TCGCACAGTT CGGCTCCCCC
GACGACCTGA TCTACCGCCC TGCCGGTCTC TTCGTGAGCC AATTTCTGGG CGAGGACGCC
GCTCTACGGC AACTCGCGGG CCGGAGCGCC GCCGAGTTCG TCCGGCCCGG TGATCCTTCC
GGCCTGCCGG TGATCGAGGG AACATTGGAT GCCCGCAGCG CCCTAGGGGT GATGTTGCGG
GAAGGGACAG ATGCCCTGGC CGTCAAGCGC GACGGCTTGT TCCTTGGCGT GCTGCGCTGG
GAGGAACTGC GCACGCAGGA GGCGCGGGCG TGA
 
Protein sequence
MIELQHLEKR YGDAFAVRDL NLVFPAGELT ALLGPSGCGK TTTLRMINRL IEPTGGRVLL 
GGRDTRDFRP EELRRGIGYV IQQIGLFPHL TVAQNVATVP ELLGWDRRRT ARRVDELLEL
VGLDPALYRT KKPAELSGGQ AQRVGVARAL AADPPVLLMD EPFGALDPLA RDHLQEAFRE
IQRRLNKTVV LVTHDIDEAL RLGDRVALMR AGSLAQFGSP DDLIYRPAGL FVSQFLGEDA
ALRQLAGRSA AEFVRPGDPS GLPVIEGTLD ARSALGVMLR EGTDALAVKR DGLFLGVLRW
EELRTQEARA