Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0172 |
Symbol | |
ID | 4058418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 160687 |
End bp | 161619 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641229170 |
Product | ABC transporter related |
Protein accession | YP_603644 |
Protein GI | 94984280 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1125] ABC-type proline/glycine betaine transport systems, ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.319596 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGAAC TGCAACACCT CGAAAAGCGT TACGGCGACG CCTTTGCCGT GCGCGACCTT AATCTCGTCT TTCCGGCGGG CGAACTCACC GCACTCCTCG GCCCGTCGGG GTGTGGCAAG ACCACAACGC TGCGGATGAT CAACCGCCTG ATCGAACCGA CCGGGGGACG CGTCCTGCTG GGAGGCCGCG ACACCCGCGA CTTCCGCCCG GAGGAGCTGC GGCGCGGCAT CGGCTACGTG ATCCAGCAGA TCGGGCTGTT TCCCCACCTC ACCGTCGCGC AGAATGTGGC AACCGTTCCC GAGCTGCTGG GCTGGGACCG CCGCCGCACG GCCCGGCGGG TGGACGAACT GCTGGAGCTG GTGGGGCTCG ACCCCGCCCT GTACCGCACC AAGAAACCCG CCGAGCTGTC GGGTGGCCAG GCGCAGCGGG TGGGTGTGGC GCGGGCGCTG GCCGCCGACC CACCGGTCCT GCTGATGGAT GAACCCTTCG GTGCCCTGGA CCCCCTGGCC CGCGACCACC TCCAGGAGGC TTTCCGGGAA ATCCAGCGGC GCCTCAACAA GACCGTGGTG CTTGTCACCC ACGACATCGA CGAGGCGCTG CGCCTCGGCG ACCGGGTCGC GCTGATGCGG GCGGGCAGTC TCGCACAGTT CGGCTCCCCC GACGACCTGA TCTACCGCCC TGCCGGTCTC TTCGTGAGCC AATTTCTGGG CGAGGACGCC GCTCTACGGC AACTCGCGGG CCGGAGCGCC GCCGAGTTCG TCCGGCCCGG TGATCCTTCC GGCCTGCCGG TGATCGAGGG AACATTGGAT GCCCGCAGCG CCCTAGGGGT GATGTTGCGG GAAGGGACAG ATGCCCTGGC CGTCAAGCGC GACGGCTTGT TCCTTGGCGT GCTGCGCTGG GAGGAACTGC GCACGCAGGA GGCGCGGGCG TGA
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Protein sequence | MIELQHLEKR YGDAFAVRDL NLVFPAGELT ALLGPSGCGK TTTLRMINRL IEPTGGRVLL GGRDTRDFRP EELRRGIGYV IQQIGLFPHL TVAQNVATVP ELLGWDRRRT ARRVDELLEL VGLDPALYRT KKPAELSGGQ AQRVGVARAL AADPPVLLMD EPFGALDPLA RDHLQEAFRE IQRRLNKTVV LVTHDIDEAL RLGDRVALMR AGSLAQFGSP DDLIYRPAGL FVSQFLGEDA ALRQLAGRSA AEFVRPGDPS GLPVIEGTLD ARSALGVMLR EGTDALAVKR DGLFLGVLRW EELRTQEARA
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