| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0140 |
|---|
| Symbol | sucA |
|---|
| ID | 4057340 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008025 |
|---|
| Strand | - |
|---|
| Start bp | 128181 |
|---|
| End bp | 131141 |
|---|
| Gene Length | 2961 bp |
|---|
| Protein Length | 986 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641229137 |
|---|
| Product | 2-oxoglutarate dehydrogenase E1 component |
|---|
| Protein accession | YP_603612 |
|---|
| Protein GI | 94984248 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0567] 2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, and related enzymes |
|---|
| TIGRFAM ID | [TIGR00239] 2-oxoglutarate dehydrogenase, E1 component |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTTTCG AAGTTCCAGC GTGCCCCTGT GACTCAGGAC GGAACAGCGC AGCGCGCTCC
GGACTGCAGT CTCTTTTCGG AACGAGGGGT ATGCTGAAAG GCGTTATGAC GCAGTCGCAG
ACCATCATGT CCGGCGGGAA CGCGGCCTTT ATCGAGGGGC TGTACGAGGC GTATCTGGCC
GACCCGCAGA GCGTGGCACC CGAATGGCGT GCCTACTTCG ACGAGCTGCG CGGCGGGACG
AGCGAGACGG CGCACTCGGC GGTTCAGCAG GCCTTTTATC AGCTCGGCAC CCAGCGCCGC
GGGCTGGCGG CCACCGCCTC GACCGCGCCC GCCAGCGCGA GCCTGAGCGG CGCGCAGCAG
GCGGCCAGTG CCCTGATCAC CGCCTACCGC GTGTATGGCC ACATCAGCGC CCGCACCAAC
CCGCTCAAGA TGCGCGGCCT CCCGGTCGTG CCCGAACTCA CGCCGGAGTT CTACGGCCTC
TCCGACACCG AGCTGAACGA GCACGTCCAG GAAGGGGCCT TTAGCGGCAC GCTGCGAGAC
GTGATCGCGC AACTCCAGCA GACCTACTGC GGCGCCATCG GCTTCGAGTT CAATTACCTT
CCCGCACCCG AGCGCAAGTG GTTCCAGGAG CGCATCGAGC CGACCCGCGG ACGCGGCACG
TACTCGGCTG AAGAGCGCCG CCGCTTTTTC AAGAAGCTCA ACGCCGCAGA AGGCCTGGAG
CGCTACCTGC ACATCAAGTA TGTGGGCCAG AAGCGCTTCT CGCTGGAAGG GAGCGAGAGC
TTCATTCCGC TGCTTGACCG CATCATTCAG CAGGCTGGGA AATACGGCGT GAAGGAGACG
GTCATCGGCA TGGCTCACCG CGGGCGCCTG AACGTGCTGG TCAACATCTT CGGCAAGAAG
CCCGCTGACC TTTTCGCAGA GTTCGAGGGC AAGAAAAAGC TCAGCGACAA CCCCGATGTG
GCCGGCGACG TGAAGTACCA CATGGGCTTT TCCAGCGACG TGCGCACGCC GGGCGGCCCG
ATGCACCTCG CGCTCGCCTT TAACCCCAGC CACCTGGAGA TCGTGTCACC GGTTGTGCAC
GGCAGTGTGC GCGCCCGCCA GGACCGCCGC GGCGACACGG AGCGCAAGCA GGTGCTCCCG
ATTACCGTCC ACGGTGACGC CGCCGTCAGC GGACAGGGCG TGGTGATGGA GACCCTCAAC
CTCTCGCGCC TGCGCGGCTT CACGACGGGT GGAGCGGTGC GCATCGTCAT CAACAACCAA
ATCGGCTTCA CCGTCAGCGA TCCGCGCGAC ACCCGCTCCA GTCGCTACTG CACCGATGTG
GCCAAGATCG CCAACGCACC CGTACTGCAC GTCAATGGCG ACGACCCGGA GGCGGTGGCG
TTCTGCGGCG ACCTCGCGCT GGAATACCGC CAGACCTTCG GCAAGGACGT CTTTATCGAC
CTGATCTCCT TCCGTCGCCA CGGCCACAAC GAGGCCGATG ACCCCACCAT GACCCAGCCC
ATCATGTACC GCGAGATCAA GGGGCACCCC GGCACCCGTG CCCTGTATGC GGCGGAACTG
GAGCGGGCGG GCGTGCTGAA GCCGGGCGAG GCCGACGAAT TCATCGAGCG GTACCGTGAC
CGGCTGGACG CTGGAGACGC GGTGGTCGAG GAAATCGAAA ACCTGGAGCA GAGCGCGCTC
GCCGCTGACT GGAGCAAATA CGTCCACACC CACTGGACCG AGGAGACGCC CACGGCAGTC
CCCCAAGCCA CCCTCACCGA GCTGGGCCTC AAGCTGGCCG AGGTGCCCGC GGGGTTCCAA
ACCCACCGCG GCGTCAAGCG CGTGCTCGAC GCCCGCCGAG CGATGGCCAA GGGCGAGCAG
CCCCTCGACT GGGGCATGGG CGAGATGCTG GCCTATGCGA CCCTGCTGGT GGAGGGCTAC
AGCGTGCGCC TCGACGGCCA AGATTCGGGA CGCGGCACCT TCAGCCACCG CCACGCCGTC
TTGCACGACC AGAATGCCCA AGACCCCATG AACGAGGAAT ACGTAAGCCT GGCTCACCTG
TCACCCAACC AGGGCCGGGT GGAGATCGTA GACTCTACGC TCTCCGAGGA GGCGGTGCTG
GCCTTTGAGT ACGGCTACAG CACGTCCGAA CCCAAGGCGC TGGTCGCCTG GGAAGCGCAG
TTTGGGGACT TCGCCAACGG CGCGCAGGCG GTGATCGACC AGTTCCTCAG CGCGGGCGAG
AGCAAGTGGC AGCGCCTCTC GGGGCTGACC ATGCTGCTTC CGCACGGCTA CGAGGGAGCG
GGGCCAGAAC ACTCCAGCGC CCGGCTGGAG CGCTACCTGC AGCTGTGCGC GCAGAAGAAC
ATGCAGGTGG TGGTCCCCAG CAGCGCCGCG CAGATCTTCC ACCTGCTGCG CCGTCAGGTG
CTGCGCCCCT ACCGCAAGCC GCTCATCGTG ATGACGCCCA AGAGCCTGCT GCGCAACAAG
CTCGCCATGA GCCCGCTCTC CGAACTCTCG GAGGGCCGCT TCCAGGAGGT CATCGGCGAC
GACACCGTAC AAAAGGCCCG CCGCGTGGTG ATCAGCTCCG GCAAGCTGCA CTGGGAACTC
TTCGAGGCGC GCGACGCCGA CAAGGAAGGC TACGCGGGCA CAGCGCTGAT CCGCCTCGAA
CAGCTCTACC CCTTCCCGGC AGAAGCGCTG CGCGCCGAAC TCGCTCGGCA CCCCGGCGCA
CAGGTCGTCT GGGCGCAGGA GGAACCGGAA AACCAGGGAG CGTGGCTGAT GATCCGCGAG
GACCTCGAGC AGGCACTGGC AGAAGGGCAG ATCCTTACTC ACGCCAGCCG TCCGCGCTCG
GCCAGCACGG CTGTCGGCTA CGCCAGCGTG CACGCGCTGG AGCAGGCGCA GGTGATTGCC
GCTGCACTCG GCGAGCCAGT CACGCGGAAG GCGGTCGAGG CGGAAGTCCG CAAAACCGCG
CAGACCGGCG TACAGAGCTG A
|
|---|
| Protein sequence | MLFEVPACPC DSGRNSAARS GLQSLFGTRG MLKGVMTQSQ TIMSGGNAAF IEGLYEAYLA
DPQSVAPEWR AYFDELRGGT SETAHSAVQQ AFYQLGTQRR GLAATASTAP ASASLSGAQQ
AASALITAYR VYGHISARTN PLKMRGLPVV PELTPEFYGL SDTELNEHVQ EGAFSGTLRD
VIAQLQQTYC GAIGFEFNYL PAPERKWFQE RIEPTRGRGT YSAEERRRFF KKLNAAEGLE
RYLHIKYVGQ KRFSLEGSES FIPLLDRIIQ QAGKYGVKET VIGMAHRGRL NVLVNIFGKK
PADLFAEFEG KKKLSDNPDV AGDVKYHMGF SSDVRTPGGP MHLALAFNPS HLEIVSPVVH
GSVRARQDRR GDTERKQVLP ITVHGDAAVS GQGVVMETLN LSRLRGFTTG GAVRIVINNQ
IGFTVSDPRD TRSSRYCTDV AKIANAPVLH VNGDDPEAVA FCGDLALEYR QTFGKDVFID
LISFRRHGHN EADDPTMTQP IMYREIKGHP GTRALYAAEL ERAGVLKPGE ADEFIERYRD
RLDAGDAVVE EIENLEQSAL AADWSKYVHT HWTEETPTAV PQATLTELGL KLAEVPAGFQ
THRGVKRVLD ARRAMAKGEQ PLDWGMGEML AYATLLVEGY SVRLDGQDSG RGTFSHRHAV
LHDQNAQDPM NEEYVSLAHL SPNQGRVEIV DSTLSEEAVL AFEYGYSTSE PKALVAWEAQ
FGDFANGAQA VIDQFLSAGE SKWQRLSGLT MLLPHGYEGA GPEHSSARLE RYLQLCAQKN
MQVVVPSSAA QIFHLLRRQV LRPYRKPLIV MTPKSLLRNK LAMSPLSELS EGRFQEVIGD
DTVQKARRVV ISSGKLHWEL FEARDADKEG YAGTALIRLE QLYPFPAEAL RAELARHPGA
QVVWAQEEPE NQGAWLMIRE DLEQALAEGQ ILTHASRPRS ASTAVGYASV HALEQAQVIA
AALGEPVTRK AVEAEVRKTA QTGVQS
|
|---|
| |