Gene Dgeo_0136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0136 
Symbol 
ID4057336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp124577 
End bp125290 
Gene Length714 bp 
Protein Length237 aa 
Translation table11 
GC content66% 
IMG OID641229133 
Productmetal-dependent hydrolase 
Protein accessionYP_603608 
Protein GI94984244 
COG category[R] General function prediction only 
COG ID[COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.609022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCTTCCA GCAGCGTGGC TACACTAGGA GCCATGCAGA TTCGTTTTCT GGGCCAGAGC 
GCCTTCCTGC TGACAAGCGG TGTCCATCAG CTGCTGATTG ACCCCTTTAT CGCGGGAAAT
CCCAAGTCAC CCGTCACCCT CGAGGAGGCG CTGGGCTGGA AGGTGGATGC GGTGCTGATC
AGCCACGCGC ACGGTGACCA CTGGGGCAAC GCACTGGACT TTGGCCGGGC AGGGGTACCC
GTCATCGGCA CCGCTGAGAT CGGCGGGTAC GCGCAGAAAA ACGGCGCACA GAACGCAATT
GGCATGAACA TCGGCGGCAC CTACCGTGCT CCCTGGGGGA GCGTCACCCT CACCCCGGCT
TGGCACTCCT CCTCCTTTCC CGACGGTACC TACGGTGGAA TGCCGACCGG CCTGATCATC
GAGATGGACG GGGTTCGGGT GTACCACGCG GGCGACACCA ACCTGTTCAG CGACATGCGC
CTGATTGGGG ACCGCGGGCT GGACGTGGCT CTGCTGCCGA TCGGGGATCA CTACACCATG
GGGCCGGAGG AGGCGGCCCG CACCCTGGAG CTGCTGCGCC CACGTGTCGC CATTCCCATG
CACTACGGCA CCTTTCCGGT CCTGACCGGT GACCCGCAGG TCTTTGCGCG GGAAGGCCGG
GCGCGCGGCG TGGACGTGCG CGTGCTGGCG CCAGGAGAGA CGGCGGAGGT GTGA
 
Protein sequence
MSSSSVATLG AMQIRFLGQS AFLLTSGVHQ LLIDPFIAGN PKSPVTLEEA LGWKVDAVLI 
SHAHGDHWGN ALDFGRAGVP VIGTAEIGGY AQKNGAQNAI GMNIGGTYRA PWGSVTLTPA
WHSSSFPDGT YGGMPTGLII EMDGVRVYHA GDTNLFSDMR LIGDRGLDVA LLPIGDHYTM
GPEEAARTLE LLRPRVAIPM HYGTFPVLTG DPQVFAREGR ARGVDVRVLA PGETAEV