Gene Dgeo_0103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0103 
Symbol 
ID4058700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp96805 
End bp97908 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content66% 
IMG OID641229100 
Productpeptidase S1 and S6, chymotrypsin/Hap 
Protein accessionYP_603575 
Protein GI94984211 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGCCTG CCCTGCGCGC CGCCGGAATT CTGCTGTTGC TCGCCGGGGC GGTCACCGGG 
GCCTATGTCA CCGGCCGCGT CAGTGCGCAA CGTGCCCTGG TGACCCCCGA TGAGATCAAC
ACTGTCGAGG TCACGCAAAA AGCCCTTCAG GCGGTCGTGC GGGTAGACAA CCGGCTCCGC
AAGGACGTGC TGCAGCCGGG TGACGATCCC GTCGAGACGG GCAGCGGGTT CTTTTATAAG
CAGAACCTGA TTGTCACCAA CTACCACGTC ATTCAGGACC AGGAGTCGGT GAGTGTCACC
CTCTACAACG GGCGGCGAGT GCCGGCGCGG GTGGAGGGCA TTGACCCCGG CATCGACATC
GCGATCCTGC GGGTGACCGG TGTCACGGCT CCCAAGACCC TCAGCTTCGG GCGCAGCGCG
GGTCTGATTC CAGGGCAGAA GCTGATCACG ATCGGTACGC CCCTCAAGAT CCAGAACTTC
GTGACGACCG GGGTCTTTAG TGTCTTGGCC AGCGCGCGCG ACGTGCCGCG CAACGATCAG
CTCGGGCAGG AGATCGGCCA GTACCTGATC ACCAGTGCCA ACATTCAGCA GGGCAACAGC
GGCGGACCCG TCCTCGATTC GCGCGGAGCG GTGGTCGGGG TGGCCGACGC CAACGCGGCA
CCCAACAGCT TCGTGCCCGG TGTGATTGGC ATTGCCATTC CCGGGGACCT GGTCCGCCAG
AGCCTCGACG ACCTGGAAAA GATCGGCGTG CCCCAGCGCG GTACTCTGGG CGTGACGCTG
GTGGACCTCG ACAGCCTCGA TCCGGCCCTG CGCCAGCTCG CGGGCCTCAG CAGCAGTGAG
GGCGCCCTGG TGGATGAGGT GCCTGCCGGG ACCGCCGGAG CCAGAGCGGG CCTGCGCGGC
TCCCTGCGCA ACAGCCGCGG TCAGCTGCTC GCGCCGCTGG GCGACGTGAT CGTATCGGTA
GACGGCCAGC GGGTTCGCAA TTCCTTCGAC GTGATTCGGC TGGTCGCCGC CAAGCGGCCG
GGCCAAACCG TCACCCTGCG GGTCTGGCGC AACAAGAAGC CTGTGGACGT GAAGGTGACC
CTCCAGAAGC GCACCTTGCA ATAA
 
Protein sequence
MKPALRAAGI LLLLAGAVTG AYVTGRVSAQ RALVTPDEIN TVEVTQKALQ AVVRVDNRLR 
KDVLQPGDDP VETGSGFFYK QNLIVTNYHV IQDQESVSVT LYNGRRVPAR VEGIDPGIDI
AILRVTGVTA PKTLSFGRSA GLIPGQKLIT IGTPLKIQNF VTTGVFSVLA SARDVPRNDQ
LGQEIGQYLI TSANIQQGNS GGPVLDSRGA VVGVADANAA PNSFVPGVIG IAIPGDLVRQ
SLDDLEKIGV PQRGTLGVTL VDLDSLDPAL RQLAGLSSSE GALVDEVPAG TAGARAGLRG
SLRNSRGQLL APLGDVIVSV DGQRVRNSFD VIRLVAAKRP GQTVTLRVWR NKKPVDVKVT
LQKRTLQ