Gene Dgeo_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0087 
Symbol 
ID4058684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp81377 
End bp82045 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content67% 
IMG OID641229084 
Producttwo component transcriptional regulator 
Protein accessionYP_603559 
Protein GI94984195 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA TCCTGATTGT CGACGACGAC CCCGCCATCC TGGAGATTCT GGGCGCCTAC 
CTGCGCGCCG AGGGACACGT CGTGCTGGAG ACGCAAGACG GGACCACCGG ACGGGCCAAG
CTGGCGGAAG CTGACCTCGC CATCCTCGAC TGGATGTTGC CGGGGGCCAG CGGCCTGGAC
TTGGCGCGCC AGCAGCGCCG CGACCGTCCG GACTTCCCGA TCCTGCTGCT GACCGCGCGA
GGTGAGGAGG AGGACAAACT GCGTGGCCTG GAGGCCGGCG CCGACGACTA CGTCACCAAG
CCCTTCTCTC CTCGTGAGGT CGTGGCGCGT GTGCGAGCGC TGTTGCGGCG GGCACGCCTG
CAGGACAGCG TATCGACGGG TGGTCTGCAG CTGGACGAAC GGACCCGCAC CGCCATGCTC
GACGGGCAGG AACTCCTCCT TTCGAAGCTG GAATTTGACC TGCTGCTCAC TCTGGCGCGC
CATCCCGGCT TCGTGTGGTC GCGGGACCGT CTGCTCGAAC GGGTCTGGGG CGCCGATTTT
CCCGGTGTGG AGCGAGTGGT GGACGTTCAT ATGGCGGCTC TGCGCCGCAA ATTGGGAGAG
CACCCGGAGC AGCCGCGCTT CATCGAGACC GTGCGCGGTG TGGGATACCG TTTCCGGGAG
GAGGCATGA
 
Protein sequence
MARILIVDDD PAILEILGAY LRAEGHVVLE TQDGTTGRAK LAEADLAILD WMLPGASGLD 
LARQQRRDRP DFPILLLTAR GEEEDKLRGL EAGADDYVTK PFSPREVVAR VRALLRRARL
QDSVSTGGLQ LDERTRTAML DGQELLLSKL EFDLLLTLAR HPGFVWSRDR LLERVWGADF
PGVERVVDVH MAALRRKLGE HPEQPRFIET VRGVGYRFRE EA