Gene Dgeo_0050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDgeo_0050 
Symbol 
ID4058491 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDeinococcus geothermalis DSM 11300 
KingdomBacteria 
Replicon accessionNC_008025 
Strand
Start bp45266 
End bp46681 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content68% 
IMG OID641229046 
Productcyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_603522 
Protein GI94984158 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGCTT CCTCACGGAG TGGTCGGCCC GGCACCGTTC GTTCGCCCTC TGGTCCGCAG 
GTGGCCTGGC TGGCCGCCGG GCTGACCGCC GCCGCCCTGG CTGCCCGCCA GGTGCGCCGT
TCCGCCGCGA CACCCGAGCA GCTGCGCACC GCGGCCCTGG ACGTGCTGGA GGCGGCCTTG
CCGCAGCAGC GAACCTTCGA CGTGCAGCTC TGGGACGGGA CCGTCCTGCC CGCCACCGTG
TCGCCCGCTA CGGCGCGCGT GATACTCAAT AGCGAACACG CGCTGGGCCG AATGCTGCGC
CTGCCGCTTG ACCTTGCGCT CGGCGAGGCG TATCTGCGCG GCGACTTCGA GATCGAGGGA
GACGTGAGCG TGGTCGCGGG CATCACCGAG GCCTTTGACA AGCCGCTCAG CACCGCTCAG
GTTGTTCGGT TGCTGGGGGA AGTCCAGCTG CTGCGCCGCC ACGCAGGACC CGCGCCCCAC
CCGGTGACCG CGCAGCTCCA CGGCAACCCC CATACCCGCG AGCGTGACCA GCAGGCGATC
ACCTACCACT ACGACATCTC CAACGACTTC TACCGGCTGT GGCTGGATCA ACGGATGGTG
TATTCCTGCG GATATTTCCC CACCGGCGTC GAGACGCTCG ACCAGGCGCA GGAGGCCAAG
CTGGAACACA TCTGCCGCAA GCTGCGCCTG ACTCAAGGCG AGCGGCTGCT GGACATTGGC
TGCGGCTGGG GCGGCCTGGC GATCTACGCC GCCCAGCACT ACGGCGTGGA GGTCCTAGGC
GTGACCCTCT CCGAAGCGCA GCTGCGCGAG GGCCGCGCGC GGGTGGAGGC GGCAGGCCTC
CGGGACCGTG TTCGGCTAGA ACTGCGCGAT TACCGCGACG TGGAGGGACA GTTCGACAAG
ATTTCGAGCG TCGGGATGGC CGAACATGTG GGCCGCCGCA ACATGCCCGA GTATTTCGCG
ACGGCCTACC GCGTTCTGAA GCCCGGCGGC CTGATGATGA ACCACGCCAT CGCAGCGGGC
ATTCAGCCGT CGAAACTGCC CCAGTGGGTG CAGGTGCTCG CCTCGGGCAA CTTCAGCCAG
AAGTACGTCT TCCCCGACGG GGAGCTGTTG CCCCTCTGGG AGACTCTCCA GCACGCCGAG
CGGGCCGGGT TCGAGGTTCG CGACGTGGAG AACCTGCGCG AGCACTACGC CCGCACCCTC
GCTTTCTGGT CACACAACCT CGAAGCTCAC CGCGACGAGG CCCGTGCTCT GGTGGGCGAG
CAGCGCTTCC GGCTGTGGCG GCTCTACCTG GCGGCCTGCG TGAACTACTT CCGGGGCGGC
CAGCTCGCCA TCTTTCAGAG CCTGCTCGCC AAGCCGGACG CGGCGGGGCG GGTGAGGGTG
CCGCTGAGCC GGGCAGATCT ATACCGGGAG GAGTGA
 
Protein sequence
MSASSRSGRP GTVRSPSGPQ VAWLAAGLTA AALAARQVRR SAATPEQLRT AALDVLEAAL 
PQQRTFDVQL WDGTVLPATV SPATARVILN SEHALGRMLR LPLDLALGEA YLRGDFEIEG
DVSVVAGITE AFDKPLSTAQ VVRLLGEVQL LRRHAGPAPH PVTAQLHGNP HTRERDQQAI
TYHYDISNDF YRLWLDQRMV YSCGYFPTGV ETLDQAQEAK LEHICRKLRL TQGERLLDIG
CGWGGLAIYA AQHYGVEVLG VTLSEAQLRE GRARVEAAGL RDRVRLELRD YRDVEGQFDK
ISSVGMAEHV GRRNMPEYFA TAYRVLKPGG LMMNHAIAAG IQPSKLPQWV QVLASGNFSQ
KYVFPDGELL PLWETLQHAE RAGFEVRDVE NLREHYARTL AFWSHNLEAH RDEARALVGE
QRFRLWRLYL AACVNYFRGG QLAIFQSLLA KPDAAGRVRV PLSRADLYRE E