Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dgeo_0042 |
Symbol | |
ID | 4057008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Deinococcus geothermalis DSM 11300 |
Kingdom | Bacteria |
Replicon accession | NC_008025 |
Strand | - |
Start bp | 38691 |
End bp | 39425 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641229038 |
Product | cyclase/dehydrase |
Protein accession | YP_603514 |
Protein GI | 94984150 |
COG category | [S] Function unknown |
COG ID | [COG5637] Predicted integral membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.64456 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACAGA CACGCAGCTT GCAGAGGGCC AGATTCTCCG AACGTCTGCT GTTCGGGGGA CTCGGCCTAG GCCTTCTTCT CCTCAGCCGG GGCCAATCGG GACAGACCCG GGTGCTGCTG GGCACCGGCG GAGCATTGCT ACTGGTGGGC GCAGTCAGGG GACGCGGCGT GGGGGGTTCG CCTCAGGGCC TCCTACGCGC ACCCGAGGAC ACCATCACCA TCAGCAAGGC CGTGACCATC GGCCTCCCGC CCGAGGAGCT GTACGCCTTT TGGCGCCCCT TGAAGAGCCT GCCGCGCTTC ATGGACCATC TCGAATCCGT GACGCTGCAG GGAGACGGAC GCTCGCACTG GGTGGCGAAG GGGCCAGCGG GCAGCCACGT CGAGTGGGAC GCCGAGATGA CCGAGGATGT GCCGGGACGC CGGCTGGCTT GGCGTTCGCT GGAGGGGTCG CAGATCTACA ACGAGGGCCA GGTGGACTTT CGGGCCGCGC CGGGAGACCG GGGGACTGAG GTCCAGGTGA CGCTGACCTA CCGCCCGCCG GCGGGCAGGC TGGGAGCCAG CGTCGCGCGG CTGCTGGGCG AGGAACCGGC CGTGCAGATC GAAGAGGACC TGCGGCGGCT CAAGCGCCTG CTGGAGGTGG GGGAGCTGCC CACCACCGAG GGGCAGTCCA GCGGGCGCCA GACGCCGCTG GGCAAACTGG AGGCGAAGAT GTACGACAAC GCGAGGACCT CATGA
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Protein sequence | MQQTRSLQRA RFSERLLFGG LGLGLLLLSR GQSGQTRVLL GTGGALLLVG AVRGRGVGGS PQGLLRAPED TITISKAVTI GLPPEELYAF WRPLKSLPRF MDHLESVTLQ GDGRSHWVAK GPAGSHVEWD AEMTEDVPGR RLAWRSLEGS QIYNEGQVDF RAAPGDRGTE VQVTLTYRPP AGRLGASVAR LLGEEPAVQI EEDLRRLKRL LEVGELPTTE GQSSGRQTPL GKLEAKMYDN ARTS
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