| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_0037 |
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| Symbol | |
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| ID | 4057003 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Deinococcus geothermalis DSM 11300 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008025 |
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| Strand | - |
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| Start bp | 34598 |
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| End bp | 35398 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641229033 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_603509 |
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| Protein GI | 94984145 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.848154 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCACTC CGCCCCGCTT TGTTCCTCCG CACGGTTTCC GGCGCTTGCG GCTGCTGCTT
GCCTGGGACG GCACGGACTT CGCGGGATGG CAGGCCCAGC GGGACGTACC GAGCGTGCAG
GATACCCTGT ATGCCGCACT GCTGCGCTTG ACGGAGGAGG CAGCTCGACC CGTCGCCGCG
GGCCGTACCG ACGCAGGTGT TCATGCCGAG GCGATGCCCG CCCACGTGGA CGTGCCGCAG
AGCTTCCGTA TTCCCGCCAA GAAGCTTGCC CGGGCGCTGA ACGCCCACCT TCCCCCCAGC
GTGGCAGTGC TGGAAGCTGA GGAGGCCCCC ACTGGCTTCC ACGCCCGCTT TTCCTGCACC
GAGCGGCGGT ACACCTACCG TCTGCTGAAC ACCCCGCAGC GCCATCCCCT CTGGAGGGGC
CGCGCACTGC ATGTCCCCGG CGCCCTCGAC GTGCCTGCGA TGAACGCAGC CGCCGCTTGT
TTGCTCGGCA CCCACGACTT TGCCGCCTTT GCCACCCGCG AGGACCGCCA GACGGTGCGG
GAACTGCGGG CACTCGCCGT TCACCCCGGC CCGGTGGTTC CCGGCGGAAG GATTTGGGAG
GTGCGGGTCG CGGGGGAGAG CTTCCTGCGC CAGATGGTGC GCGGGCTGGT GGGCACGCTG
CTGTTGGTGG GGCAGGGCAA ACTGGGGCAG GAGGACGTGA CGGCCGTCCT CGTCGGGCGC
GAACGGGCGC GGGCCGGGGC AAATGTGCCG GGCTATGGGC TGACGTTCAC GGGGGCGAGC
TACGGAGGGT TTGAGGCCTG A
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| Protein sequence | MTTPPRFVPP HGFRRLRLLL AWDGTDFAGW QAQRDVPSVQ DTLYAALLRL TEEAARPVAA
GRTDAGVHAE AMPAHVDVPQ SFRIPAKKLA RALNAHLPPS VAVLEAEEAP TGFHARFSCT
ERRYTYRLLN TPQRHPLWRG RALHVPGALD VPAMNAAAAC LLGTHDFAAF ATREDRQTVR
ELRALAVHPG PVVPGGRIWE VRVAGESFLR QMVRGLVGTL LLVGQGKLGQ EDVTAVLVGR
ERARAGANVP GYGLTFTGAS YGGFEA
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